SYMMETRY-MODIFIED CONFORMATIONAL MAPPING AND CLASSIFICATION OF THE MEDIUM RINGS FROM CRYSTALLOGRAPHIC DATA .2. EXO-UNSATURATED AND HETEROCYCLIC 7-MEMBERED RINGS

被引:11
作者
ALLEN, FH
HOWARD, JAK
PITCHFORD, NA
VINTER, JG
机构
[1] UNIV DURHAM,DEPT CHEM,DURHAM DH1 3LE,ENGLAND
[2] UNIV CAMBRIDGE,CHEM LAB,CAMBRIDGE CB2 1EW,ENGLAND
来源
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE | 1994年 / 50卷
关键词
D O I
10.1107/S0108768194000911
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Crystallographic results derived from the Cambridge Structural Database (CSD) have been used to perform a systematic conformational analysis for methylenecycloheptane, oxocycloheptane, azocycloheptane, oxepane, azepane and for the epsilon-lactone and epsilon-lactam fragments. Conformational mappings based on symmetry-adapted deformation coordinates and principal component scores show that ring conformations in these fragments fall almost exclusively on the chair-twist-chair pseudorotation pathway. Symmetry-modified Jarvis-Patrick clustering has been used to generate conformational classifications in a semi-automated manner. A manual classification was preferred for the oxocycloheptanes due to wide conformational diversity within a rather small data set. Energy calculations have also been carried out for these systems using force-field methods and a novel conformation-hunting algorithm that attempts to locate all local minima without recourse to ring cleavage and reformation. There is good qualitative agreement between the crystallographic observations of conformation and the calculated features of the potential energy hypersurface, despite the wide variety of substitution patterns covered by the crystallographic results.
引用
收藏
页码:382 / 395
页数:14
相关论文
共 31 条
  • [1] TABLES OF BOND LENGTHS DETERMINED BY X-RAY AND NEUTRON-DIFFRACTION .1. BOND LENGTHS IN ORGANIC-COMPOUNDS
    ALLEN, FH
    KENNARD, O
    WATSON, DG
    BRAMMER, L
    ORPEN, AG
    TAYLOR, R
    [J]. JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1987, (12): : S1 - S19
  • [2] SYMMETRY-MODIFIED CONFORMATIONAL MAPPING AND CLASSIFICATION OF THE MEDIUM RINGS FROM CRYSTALLOGRAPHIC DATA .1. CYCLOHEPTANE
    ALLEN, FH
    HOWARD, JAK
    PITCHFORD, NA
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1993, 49 : 910 - 928
  • [3] THE DEVELOPMENT OF VERSION-3 AND VERSION-4 OF THE CAMBRIDGE STRUCTURAL DATABASE SYSTEM
    ALLEN, FH
    DAVIES, JE
    GALLOY, JJ
    JOHNSON, O
    KENNARD, O
    MACRAE, CF
    MITCHELL, EM
    MITCHELL, GF
    SMITH, JM
    WATSON, DG
    [J]. JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1991, 31 (02): : 187 - 204
  • [4] AUTOMATED CONFORMATIONAL-ANALYSIS FROM CRYSTALLOGRAPHIC DATA .2. SYMMETRY-MODIFIED JARVIS-PATRICK AND COMPLETE-LINKAGE CLUSTERING ALGORITHMS FOR 3-DIMENSIONAL PATTERN-RECOGNITION
    ALLEN, FH
    DOYLE, MJ
    TAYLOR, R
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1991, 47 : 41 - 49
  • [5] SYMMETRY-MODIFIED CONFORMATIONAL MAPPING AND CLASSIFICATION OF THE MEDIUM RINGS FROM CRYSTALLOGRAPHIC DATA .3. ENDO-UNSATURATED 7-MEMBERED RINGS
    ALLEN, FH
    GARNER, SE
    HOWARD, JAK
    PITCHFORD, NA
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1994, 50 : 395 - 404
  • [6] AUTOMATED CONFORMATIONAL-ANALYSIS FROM CRYSTALLOGRAPHIC DATA .3. 3-DIMENSIONAL PATTERN-RECOGNITION WITHIN THE CAMBRIDGE STRUCTURAL DATABASE SYSTEM - IMPLEMENTATION AND PRACTICAL EXAMPLES
    ALLEN, FH
    DOYLE, MJ
    TAYLOR, R
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1991, 47 : 50 - 61
  • [7] CONFORMATIONAL-ANALYSIS .79. IMPROVED FORCE FIELD FOR CALCULATION OF STRUCTURES AND ENERGIES OF CARBONYL-COMPOUNDS
    ALLINGER, NL
    TRIBBLE, MT
    MILLER, MA
    [J]. TETRAHEDRON, 1972, 28 (05) : 1173 - &
  • [8] ON THE CONFORMATIONS OF LACTONE RINGS
    ALLINGER, NL
    [J]. PURE AND APPLIED CHEMISTRY, 1982, 54 (12) : 2515 - 2522
  • [9] VIBRATIONAL-SPECTRA, POTENTIAL FUNCTIONS, AND CONFORMATIONS OF CYCLOHEPTANONE
    BOCIAN, DF
    STRAUSS, HL
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1977, 67 (03) : 1071 - 1081
  • [10] VIBRATIONAL-SPECTRA, CONFORMATIONS, AND POTENTIAL FUNCTIONS OF CYCLOHEPTANE AND RELATED OXEPANES
    BOCIAN, DF
    STRAUSS, HL
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1977, 99 (09) : 2866 - 2876