COMPUTER-ASSISTED MODELING OF SUBTILISIN ENANTIOSELECTIVITY IN ORGANIC-SOLVENTS

被引:35
作者
FITZPATRICK, PA
RINGE, D
KLIBANOV, AM
机构
[1] MIT, DEPT CHEM, CAMBRIDGE, MA 02139 USA
[2] BRANDEIS UNIV, DEPT BIOCHEM, WALTHAM, MA 02254 USA
关键词
SUBTILISIN; COMPUTER MODELING; ENANTIOSELECTIVITY; ENZYMES; ORGANIC SOLVENTS;
D O I
10.1002/bit.260400613
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
In order to rationalize our discovery of a marked dependence of subtilisin's enantioselectivity on the organic solvent used as the reaction medium, we employed the X-ray crystal structure of the enzyme and the means of interactive computer modeling to construct the structures of the reactive enzyme-substrate complexes. For subtilisin-catalyzed transesterifications between vinyl butyrate and S and R enantiomers of chiral secondary alcohols XCH(OH)Y, the computer simulation data clearly explain a higher reactivity of the former enantiomer on the basis of severe steric hindrances experienced by the latter enantiomer in the active site of subtilisin. The models of binding derived by computer modeling also successfully predicted changes in subtilisin enantioselectivity as a function of the sizes of the X and Y substituents in the nucleophile and upon addition of certain inhibitors.
引用
收藏
页码:735 / 742
页数:8
相关论文
共 50 条
[21]   THE NEUROTOXICITY OF ORGANIC-SOLVENTS, STUDIED WITH INVITRO MODELS [J].
TAHTI, H .
ATLA-ALTERNATIVES TO LABORATORY ANIMALS, 1992, 20 (02) :290-296
[22]   EFFECTS OF ORGANIC-SOLVENTS ON USE OF TARBUSH BY SHEEP [J].
ESTELL, RE ;
ANDERSON, DM ;
HAVSTAD, KM .
JOURNAL OF CHEMICAL ECOLOGY, 1994, 20 (05) :1137-1142
[23]   EXPOSURE TO ORGANIC-SOLVENTS AND RISK OF HEMATOLOGICAL MALIGNANCIES [J].
BRANDT, L .
LEUKEMIA RESEARCH, 1992, 16 (01) :67-70
[24]   ENHANCEMENT OF ENZYMATIC PRODUCTION OF CYCLODEXTRINS BY ORGANIC-SOLVENTS [J].
LEE, YD ;
KIM, HS .
ENZYME AND MICROBIAL TECHNOLOGY, 1991, 13 (06) :499-503
[25]   CNS DEPRESSANT EFFECTS OF VOLATILE ORGANIC-SOLVENTS [J].
EVANS, EB ;
BALSTER, RL .
NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS, 1991, 15 (02) :233-241
[26]   Correlation between catalytic activity and secondary structure of subtilisin dissolved in organic solvents [J].
Xu, K ;
Griebenow, K ;
Klibanov, AM .
BIOTECHNOLOGY AND BIOENGINEERING, 1997, 56 (05) :485-491
[27]   Improving lipase enantioselectivity in organic solvents by forming substrate salts with chiral agents [J].
Shin, JS ;
Luque, S ;
Klibanov, AM .
BIOTECHNOLOGY AND BIOENGINEERING, 2000, 69 (05) :577-583
[28]   SYNTHESIS OF PROTEIN-CONTAINING POLYMERS IN ORGANIC-SOLVENTS [J].
YANG, Z ;
WILLIAMS, D ;
RUSSELL, AJ .
BIOTECHNOLOGY AND BIOENGINEERING, 1995, 45 (01) :10-17
[29]   Modeling enzyme reactivity in organic solvents and water through computer simulations [J].
Colombo, G ;
Carrea, G .
JOURNAL OF BIOTECHNOLOGY, 2002, 96 (01) :23-33
[30]   LIQUID DESORPTION OF ORGANIC-SOLVENTS FROM INDUSTRIAL SLUDGES [J].
CECCON, L ;
TURELLO, A ;
MOCELLIN, G ;
COLUGNATI, L .
ANALYTICA CHIMICA ACTA, 1993, 278 (01) :115-123