OLIGOPEPTIDE BIASES IN PROTEIN SEQUENCES AND THEIR USE IN PREDICTING PROTEIN CODING REGIONS IN NUCLEOTIDE-SEQUENCES

被引:234
作者
MCCALDON, P [1 ]
ARGOS, P [1 ]
机构
[1] EUROPEAN MOLEC BIOL LAB,DIV BIOCOMP,POSTFACH 102209,MEYERHOFSTR 1,D-6900 HEIDELBERG,FED REP GER
来源
PROTEINS-STRUCTURE FUNCTION AND GENETICS | 1988年 / 4卷 / 02期
关键词
D O I
10.1002/prot.340040204
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:99 / 122
页数:24
相关论文
共 30 条
[1]   SIMILARITY IN GENE ORGANIZATION AND HOMOLOGY BETWEEN PROTEINS OF ANIMAL PICORNAVIRUSES AND A PLANT COMOVIRUS SUGGEST COMMON ANCESTRY OF THESE VIRUS FAMILIES [J].
ARGOS, P ;
KAMER, G ;
NICKLIN, MJH ;
WIMMER, E .
NUCLEIC ACIDS RESEARCH, 1984, 12 (18) :7251-7267
[2]   A SENSITIVE PROCEDURE TO COMPARE AMINO-ACID-SEQUENCES [J].
ARGOS, P .
JOURNAL OF MOLECULAR BIOLOGY, 1987, 193 (02) :385-396
[3]  
BARKER WC, PROTEIN SEQUENCE DAT
[4]   DETERMINANTS OF A PROTEIN FOLD - UNIQUE FEATURES OF THE GLOBIN AMINO-ACID-SEQUENCES [J].
BASHFORD, D ;
CHOTHIA, C ;
LESK, AM .
JOURNAL OF MOLECULAR BIOLOGY, 1987, 196 (01) :199-216
[5]   PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].
BERNSTEIN, FC ;
KOETZLE, TF ;
WILLIAMS, GJB ;
MEYER, EF ;
BRICE, MD ;
RODGERS, JR ;
KENNARD, O ;
SHIMANOUCHI, T ;
TASUMI, M .
JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542
[6]  
Dayhoff M.O., 1978, ATLAS PROTEIN SEQ S3, P345
[7]  
Dayhoff M.O., 1978, ATLAS PROTEIN SEQ S3, V5, P9
[8]   A COMPREHENSIVE SET OF SEQUENCE-ANALYSIS PROGRAMS FOR THE VAX [J].
DEVEREUX, J ;
HAEBERLI, P ;
SMITHIES, O .
NUCLEIC ACIDS RESEARCH, 1984, 12 (01) :387-395
[9]   SIMILAR AMINO-ACID-SEQUENCES - CHANCE OR COMMON ANCESTRY [J].
DOOLITTLE, RF .
SCIENCE, 1981, 214 (4517) :149-159
[10]   RECOGNITION OF PROTEIN CODING REGIONS IN DNA-SEQUENCES [J].
FICKETT, JW .
NUCLEIC ACIDS RESEARCH, 1982, 10 (17) :5303-5318