Analysis of genetic polymorphisms in somaclonal variants of strawberry by RAPD markers

被引:0
作者
Bir, Md Shahidul Haque [1 ]
Haque, Md Samiul [2 ]
Haque, M. Mahbubul [2 ]
Nath, Uzzal Kumar [3 ]
Khatun, Roushan Ara [4 ]
Ali, Mohammad [2 ]
Soh, EunHee [5 ]
Park, Kee Woong [1 ]
机构
[1] Chungnam Natl Univ, Dept Crop Sci, Daejeon 34134, South Korea
[2] BINA, Mymensingh, Bangladesh
[3] Bangladesh Agr Univ, Dept Genet & Plant Breeding, Mymensingh, Bangladesh
[4] Dept Agr Extens, Farm Gate, Dhaka, Bangladesh
[5] Korea Seed & Variety Serv, Seobu Prov Off, Iksan 54521, South Korea
来源
BIOSCIENCE RESEARCH | 2018年 / 15卷 / 03期
关键词
Cluster analysis; diversity analysis; genetic distance; RAPD marker; somaclonal variants of strawberry;
D O I
暂无
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The understanding of the importance of dietary berries of maintaining human health has led to unrestrained increase of global strawberry crop production. The present work was conducted for molecular characterization and selection of genetically pure somaclonal variants of strawberry. For molecular characterization, RAPD (Random Amplified Polymorphic DNA) markers namely instead OPK-01, OPK-02, and OPK-03, showed good technical resolution and sufficient variations among the somaclonal variants. A total of 29 RAPD bands were scored, of which 27 (94.87%) by using these arbitrary primers were obtained by polymorphic amplification products. OPK-01 produced the number of polymorphic bands of 100-700 bp compared to OPK-02 and OPK-03. All the somaclonal variants produced polymorphic bands with three RAPD markers suggesting that the somaclonal variants were different from each other and genetic divergence were present among them. Thus, these markers could be used for comparison of the genetic relationships, determination of patterns of genetic variation, and measurement of genetic distance among the somaclonal variants of strawberry.
引用
收藏
页码:2840 / 2847
页数:8
相关论文
共 50 条
  • [41] A study of genetic diversity of sesame (Sesamum indicum L.) in Vietnam and Cambodia estimated by RAPD markers
    Pham, Toan Duc
    Bui, Tri Minh
    Werlemark, Gun
    Bui, Tuyen Cach
    Merker, Arnulf
    Carlsson, Anders S.
    GENETIC RESOURCES AND CROP EVOLUTION, 2009, 56 (05) : 679 - 690
  • [42] A comparative analysis of RAPD and ISSR markers for assessing genetic diversity in Iranian populations of Nigella sativa L.
    KorehKhosravi, Samira Hosseini
    Masoumiasl, Asad
    Dehdari, Masoud
    CELLULAR AND MOLECULAR BIOLOGY, 2018, 64 (01) : 52 - 59
  • [43] GENETIC DIVERSITY ANALYSIS OF THIRTEEN MUNGBEAN (VIGNA RADIATA (L.) WILCZEK) CULTIVARS USING RAPD MARKERS
    Sony, Sonia Khan
    Habib, Md Ahashan
    Islam, Mohammad Nurul
    BANGLADESH JOURNAL OF BOTANY, 2012, 41 (02): : 169 - 175
  • [44] Efficient Identification of 46 Important Strawberry Cultivars Using RAPD Markers with a Manual Cultivar Identification Diagram Strategy
    Zhao, Mizhen
    Wang, Yujuan
    Dong, Qinghua
    Li, Jinfeng
    Kayesh, E.
    Song, Changnian
    Wang, Jing
    VII INTERNATIONAL STRAWBERRY SYMPOSIUM, 2014, 1049 : 371 - 376
  • [45] Genetic diversity in an African plantain core collection using AFLP and RAPD markers
    G. Ude
    M. Pillay
    E. Ogundiwin
    A. Tenkouano
    Theoretical and Applied Genetics, 2003, 107 : 248 - 255
  • [46] Genetic diversity among three Morinda species using RAPD and ISSR markers
    Singh, D. R.
    Srivastava, Abhay K.
    Srivastava, Amit
    Srivastava, R. C.
    INDIAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (03): : 285 - 293
  • [47] Cultivars identification and their genetic relationships in Dimocarpus longan subspecies based on RAPD markers
    Yonemoto, Yoshimi
    Chowdhury, Abul Kashem
    Kato, Hidenori
    Macha, Mustad Malid
    SCIENTIA HORTICULTURAE, 2006, 109 (02) : 147 - 152
  • [48] Genetic diversity of wild and cultivated genotypes of pigeonpea through RAPD and SSR markers
    Walunjkar, Babasaheb C.
    Parihar, Akarsh
    Singh, Nirbhay Kumar
    Parmar, L. D.
    JOURNAL OF ENVIRONMENTAL BIOLOGY, 2015, 36 (02) : 461 - 466
  • [49] Genetic diversity in an African plantain core collection using AFLP and RAPD markers
    Ude, G
    Pillay, M
    Ogundiwin, E
    Tenkouano, A
    THEORETICAL AND APPLIED GENETICS, 2003, 107 (02) : 248 - 255
  • [50] Identification and genetic variation among Hibiscus species (Malvaceae) using RAPD markers
    Barik, S
    Senapati, SK
    Aparajita, S
    Mohapatra, A
    Rout, GR
    ZEITSCHRIFT FUR NATURFORSCHUNG SECTION C-A JOURNAL OF BIOSCIENCES, 2006, 61 (1-2): : 123 - 128