Crystal, molecular and electronic structure of (5S, 11R, 11aS)-11-hydroxy-5-methyl-1,2,3,4,5,6,11,11a-octahydropyrido[1,2-b]isoquinolin-5-ium iodide

被引:0
作者
Sivy, Julius [1 ]
Safar, Peter [2 ]
Zuziova, Jozefina [2 ]
机构
[1] Slovak Univ Technol Bratislava, Fac Mech Engn, Namestie Slobody 17, SK-81231 Bratislava, Slovakia
[2] Slovak Tech Univ, Fac Chem & Food Technol, Inst Organ Chem Catalysis & Petrochem, Radlinskeho 9, SK-81237 Bratislava, Slovakia
关键词
crystal structure; DFT calculation; hydrogen interactions; isoquinoline; single-crystal X-ray study;
D O I
10.2478/acs-2018-0014
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The title compound, C14H20INO, is a molecule with three stereogenic centres. It absolute configuration was derived from the synthesis and confirmed by structure determination (AD, Flack (Parsons') parameter: 0.031 (8)). The expected stereochemistry of atoms N1 was confirmed to be S, C5 was confirmed to S, C6 was confirmed to R. The central N-heterocyclic ring is not planar and adopts a half-chair conformation. A calculation of least-squares planes showed that these rings are puckered in such a manner that the five atoms: C5, C6, C7, C12 and C13 (the second ring: C1, C2, C3, C4, C5 and N1) are planar, while atom N1 is displaced from these plane with the out-of-plane displacement of -0.694 (4) and -0.670 (5) A in the second ring, respectively. Dihedral angle between the planes of the central N-heterocyclicrings is 23.4 (2)degrees. Crystal structure is also stabilized by C-H center dot center dot center dot O hydrogen interactions.
引用
收藏
页码:94 / 98
页数:5
相关论文
共 22 条
[1]   CIF applications. XV. enCIFer: a program for viewing, editing and visualizing CIFs [J].
Allen, FH ;
Johnson, O ;
Shields, GP ;
Smith, BR ;
Towler, M .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2004, 37 :335-338
[2]   DYE STABILITY UNDER EXCIMER-LASER PUMPING .2. VISIBLE AND UV DYES [J].
ANTONOV, VS ;
HOHLA, KL .
APPLIED PHYSICS B-PHOTOPHYSICS AND LASER CHEMISTRY, 1983, 32 (01) :9-14
[3]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[4]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[5]  
Brandenburg K., 1999, DIAMOND
[6]   Crystal structure determination and refinement via SIR2014 [J].
Burla, Maria Cristina ;
Caliandro, Rocco ;
Carrozzini, Benedetta ;
Cascarano, Giovanni Luca ;
Cuocci, Corrado ;
Giacovazzo, Carmelo ;
Mallamo, Mariarosaria ;
Mazzone, Annamaria ;
Polidori, Giampiero .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2015, 48 :306-309
[7]   GENERAL DEFINITION OF RING PUCKERING COORDINATES [J].
CREMER, D ;
POPLE, JA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1975, 97 (06) :1354-1358
[8]   OLEX2: a complete structure solution, refinement and analysis program [J].
Dolomanov, Oleg V. ;
Bourhis, Luc J. ;
Gildea, Richard J. ;
Howard, Judith A. K. ;
Puschmann, Horst .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2009, 42 :339-341
[9]   WinGX and ORTEP for Windows: an update [J].
Farrugia, Louis J. .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2012, 45 :849-854
[10]  
Frisch M.J., 2009, OFFICIAL GAUSSIAN 09