A STRATEGY FOR TESTING THE SUITABILITY OF CYSTEINE REPLACEMENTS IN DIHYDROFOLATE-REDUCTASE FROM ESCHERICHIA-COLI

被引:64
|
作者
IWAKURA, M
JONES, BE
LUO, JB
MATTHEWS, CR
机构
[1] NATL INST BIOSCI & HUMAN TECHNOL, TSUKUBA, IBARAKI 305, JAPAN
[2] PENN STATE UNIV, CTR BIOMOLEC STRUCT & FUNCT, DEPT CHEM, UNIVERSITY PK, PA 16802 USA
[3] PENN STATE UNIV, INST BIOTECHNOL, UNIVERSITY PK, PA 16802 USA
关键词
CYS-FREE MUTANT; DHFR; ESCHERICHIA COLI; MUTAGENESIS; PROTEIN FOLDING;
D O I
10.1093/oxfordjournals.jbchem.a124733
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Amino acid sequences in proteins can contain residues which complicate biochemical, biophysical, or protein engineering studies but which are not essential for folding or activity, Their replacement with other naturally-occurring amino acids which are not subject to such complications but which maintain essential properties of the protein is a desirable goal. A simple strategy for testing various mutants for their suitability is described for a pair of cysteine residues in dihydrofolate reductase (DHFR) from Escherichia coli. Using a reconstructed gene which preserves the amino acid sequence and introduces a variety of unique restriction sites, the cysteines at positions 85 and 152 were replaced by site-directed and cassette mutagenesis. The enzymatic activity, stability, and folding mechanism of six double mutant DHFR proteins were examined with the purpose of identifying a suitable alternative to wild type DHFR. The Cys85 --> Ala and Cys152 --> Ser double mutant DHFR was found to retain the four channel folding mechanism and have activity and stability which are comparable to the wild type enzyme, The replacement of the cysteines improved the resistance of DHFR to the irreversible loss of activity at high temperature.
引用
收藏
页码:480 / 488
页数:9
相关论文
共 50 条
  • [31] Molecular dynamics simulation of Escherichia coli dihydrofolate reductase and its protein fragments:: Relative stabilities in experiment and simulations
    Sham, YY
    Ma, BY
    Tsai, CJ
    Nussinov, R
    PROTEIN SCIENCE, 2001, 10 (01) : 135 - 148
  • [32] Chemical space of Escherichia coli dihydrofolate reductase inhibitors: New approaches for discovering novel drugs for old bugs
    Srinivasan, Bharath
    Tonddast-Navaei, Sam
    Roy, Ambrish
    Zhou, Hongyi
    Skolnick, Jeffrey
    MEDICINAL RESEARCH REVIEWS, 2019, 39 (02) : 684 - 705
  • [33] NUTRIENT-SPLIT FEEDING STRATEGY FOR DIALYSIS CULTIVATION OF ESCHERICHIA-COLI
    OGBONNA, JC
    MARKL, H
    BIOTECHNOLOGY AND BIOENGINEERING, 1993, 41 (11) : 1092 - 1100
  • [34] SEPTIC DISCITIS RESULTING FROM ESCHERICHIA-COLI UROSEPSIS
    PONTE, CD
    MCDONALD, M
    JOURNAL OF FAMILY PRACTICE, 1992, 34 (06) : 767 - &
  • [35] OVERPRODUCTION, PURIFICATION, AND CHARACTERIZATION OF FERROCHELATASE FROM ESCHERICHIA-COLI
    MIYAMOTO, K
    KANAYA, S
    MORIKAWA, K
    INOKUCHI, H
    JOURNAL OF BIOCHEMISTRY, 1994, 115 (03) : 545 - 551
  • [36] CHARACTERISTICS OF ESCHERICHIA-COLI ISOLATES FROM AVIAN CELLULITIS
    PEIGHAMBARI, SM
    VAILLANCOURT, JP
    WILSON, RA
    GYLES, CL
    AVIAN DISEASES, 1995, 39 (01) : 116 - 124
  • [37] Crotonobetaine reductase from Escherichia coli consists of two proteins
    Preusser, A
    Wagner, U
    Elssner, T
    Kleber, HP
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1999, 1431 (01): : 166 - 178
  • [38] Probing the interactions between the folding elements early in the folding of Escherichia coli dihydrofolate reductase by systematic sequence perturbation analysis
    Arai, M
    Iwakura, M
    JOURNAL OF MOLECULAR BIOLOGY, 2005, 347 (02) : 337 - 353
  • [39] Thermal unfolding molecular dynamics simulation of Escherichia coli dihydrofolate reductase:: Thermal stability of protein domains and unfolding pathway
    Sham, YY
    Ma, BY
    Tsai, CJ
    Nussinov, R
    PROTEINS-STRUCTURE FUNCTION AND GENETICS, 2002, 46 (03): : 308 - 320
  • [40] A REGULATORY MUTANT OF THE TRIMETHYLAMINE N-OXIDE REDUCTASE OF ESCHERICHIA-COLI K12
    PASCAL, MC
    LEPELLETIER, M
    GIORDANO, G
    CHIPPAUX, M
    FEMS MICROBIOLOGY LETTERS, 1991, 78 (2-3) : 297 - 300