The most prevalent proteins in the lens of the eye are called crystallins, and it is thought that aberrant crystallins may cause opacification of lens tissue. The Philly mouse, a strain with an inherited cataract, has an abnormal beta-B2-crystallin, the principal beta-crystallin in the mouse. The cDNA that codes for the beta-B2-crystallin protein has been cloned and sequenced from both the normal and the cataractous Philly mouse. The normal mouse beta-B2 cDNA is 756 nucleotides in length with 618 nucleotides of open reading frame. An in-frame deletion of 12 nucleotides has occurred in the Philly mouse cDNA, which results in the loss of 4 amino acids. The sequence of the mutant beta-B2 was analyzed against the reported structure of the normal bovine beta-B2-crystallin determined by x-ray crystallography. The region, in which the deletion of the amino acids occurs near the COOH terminus, is essential for the formation of the tertiary structure of the beta-B2-crystallin. The loss of these residues could explain the alterations that are seen with the Philly beta-B2 protein and may account for the instability of the Philly beta-B2 protein. This abnormal beta-B2-crystallin may be the cause of the cataract in this animal.