PROTEIN AND NUCLEIC-ACID HYDRATION AND COSOLVENT INTERACTIONS - ESTABLISHMENT OF RELIABLE BASE-LINE VALUES AT HIGH COSOLVENT CONCENTRATIONS

被引:52
作者
EISENBERG, H [1 ]
机构
[1] WEIZMANN INST SCI,DEPT BIOL STRUCT,IL-76100 REHOVOT,ISRAEL
关键词
PROTEIN HYDRATION; NUCLEIC ACID HYDRATION; COSOLVENT INTERACTION; GUANIDINIUM CHLORIDE DENATURATION; HALOPHILIC MALATE DEHYDROGENASE;
D O I
10.1016/0301-4622(94)00076-X
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Hydration and cosolvent interactions of biological macromolecules can be derived, subject to excluded volume corrections, from studies of density increments at constant chemical potentials of diffusible solutes through a semipermeable membrane. In addition to precision density determinations of solutions dialyzed to equilibrium, the analytical ultracentrifuge, static and dynamic light and small angle X-ray and neutron scattering, and combined pairwise use of, for instance, ultracentrifugation and neutron scattering, considerably strengthen the experimental analysis and its interpretation. We have examined hydration of bovine serum albumin (BSA) in the native and denatured states, and binding of the denaturant guanidinium chloride (GdmCl) to the latter form; hydration of DNA and interaction with NaCl and CsCl; revised values of the halophilic malate dehydrogenase (hMDH) tetramer hydration and 'binding' of salts; probing of nucleosome core particle hydration as distinct from and additionally to the evaluation of volume exclusion (holes), by use of variously sized sugar related probes. Conclusions presented are compared to results from precision calorimetry and from X-ray crystallography structures, whenever applicable, and comparisons made with alternative interpretations and experimental approaches.
引用
收藏
页码:57 / 68
页数:12
相关论文
共 63 条
[1]   MECHANISM OF POLY(ETHYLENE GLYCOL) INTERACTION WITH PROTEINS [J].
ARAKAWA, T ;
TIMASHEFF, SN .
BIOCHEMISTRY, 1985, 24 (24) :6756-6762
[2]   Hydration of DNA [J].
Berman, Helen M. .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1991, 1 (03) :423-427
[3]   BIOPHYSICAL STUDY OF HALOPHILIC MALATE-DEHYDROGENASE IN SOLUTION - REVISED SUBUNIT STRUCTURE AND SOLVENT INTERACTIONS OF NATIVE AND RECOMBINANT ENZYME [J].
BONNETE, F ;
EBEL, C ;
ZACCAI, G ;
EISENBERG, H .
JOURNAL OF THE CHEMICAL SOCIETY-FARADAY TRANSACTIONS, 1993, 89 (15) :2659-2666
[4]   PROTEIN HYDRATION - A SUCROSE PROBE [J].
BULL, HB .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1981, 208 (01) :229-232
[5]   THERMODYNAMIC ANALYSIS OF MULTICOMPONENT SOLUTIONS [J].
CASASSA, EF ;
EISENBERG, H .
ADVANCES IN PROTEIN CHEMISTRY, 1964, 19 :287-395
[6]   CLONING, SEQUENCING, AND EXPRESSION IN ESCHERICHIA-COLI OF THE GENE CODING FOR MALATE-DEHYDROGENASE OF THE EXTREMELY HALOPHILIC ARCHAEBACTERIUM HALOARCULA-MARISMORTUI [J].
CENDRIN, F ;
CHROBOCZEK, J ;
ZACCAI, G ;
EISENBERG, H ;
MEVARECH, M .
BIOCHEMISTRY, 1993, 32 (16) :4308-4313
[7]  
CHOE Y, 1994, BIOPHYS J, V66, pA158
[8]   EFFECT OF POSITIVE SUPERCOILING ON DNA COMPACTION BY NUCLEOSOME CORES [J].
CLARK, DJ ;
GHIRLANDO, R ;
FELSENFELD, G ;
EISENBERG, H .
JOURNAL OF MOLECULAR BIOLOGY, 1993, 234 (02) :297-301
[9]   LOCALIZATION OF BOUND WATER IN THE SOLUTION STRUCTURE OF THE IMMUNOGLOBULIN BINDING DOMAIN OF STREPTOCOCCAL PROTEIN-G - EVIDENCE FOR SOLVENT-INDUCED HELICAL DISTORTION IN SOLUTION [J].
CLORE, GM ;
GRONENBORN, AM .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 223 (04) :853-856
[10]   LOCALIZATION OF BOUND WATER IN THE SOLUTION STRUCTURE OF A COMPLEX OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 WITH DNA [J].
CLORE, GM ;
BAX, A ;
OMICHINSKI, JG ;
GRONENBORN, AM .
STRUCTURE, 1994, 2 (02) :89-94