3-DIMENSIONAL STRUCTURE OF THE ALKALINE PROTEASE OF PSEUDOMONAS-AERUGINOSA - A 2-DOMAIN PROTEIN WITH A CALCIUM-BINDING PARALLEL-BETA ROLL MOTIF

被引:417
作者
BAUMANN, U [1 ]
WU, S [1 ]
FLAHERTY, KM [1 ]
MCKAY, DB [1 ]
机构
[1] STANFORD UNIV,MED CTR,SCH MED,DEPT CELL BIOL,BECKMAN LABS STRUCT BIOL,STANFORD,CA 94305
关键词
BETA ROLL; CALCIUM BINDING; CRYSTAL STRUCTURE; PSEUDOMONAS-AERUGINOSA; PROTEASE;
D O I
10.1002/j.1460-2075.1993.tb06009.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The three-dimensional structure of the alkaline protease of Pseudomonas aeruginosa, a zinc metalloprotease, has been solved to a resolution of 1.64 angstrom by multiple isomorphous replacement and non-crystallographic symmetry averaging between different crystal forms. The molecule is elongated with overall dimensions of 90 x 35 x 25 angstrom; it has two distinct structural domains. The N-terminal domain is the proteolytic domain; it has an overall tertiary fold and active site zinc ligation similar to that of astacin, a metalloprotease isolated from a European freshwater crayfish. The C-terminal domain consists of a 21-strand beta sandwich. Within this domain is a novel 'parallel beta roll' structure in which successive beta strands are wound in a right-handed spiral, and in which Ca2+ ions are bound within the turns between strands by a repeated GGXGXD sequence motif, a motif that is found in a diverse group of proteins secreted by Gram-negative bacteria.
引用
收藏
页码:3357 / 3364
页数:8
相关论文
共 28 条
[1]   A SYSTEM FOR COLLECTION AND ONLINE INTEGRATION OF X-RAY-DIFFRACTION DATA FROM A MULTIWIRE AREA DETECTOR [J].
BLUM, M ;
METCALF, P ;
HARRISON, SC ;
WILEY, DC .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1987, 20 :235-242
[2]   STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES [J].
BODE, W ;
GOMISRUTH, FX ;
HUBER, R ;
ZWILLING, R ;
STOCKER, W .
NATURE, 1992, 358 (6382) :164-167
[3]   CRYSTALLOGRAPHIC R-FACTOR REFINEMENT BY MOLECULAR-DYNAMICS [J].
BRUNGER, AT ;
KURIYAN, J ;
KARPLUS, M .
SCIENCE, 1987, 235 (4787) :458-460
[4]   A METHOD OF POSITIONING A KNOWN MOLECULE IN AN UNKNOWN CRYSTAL STRUCTURE [J].
CROWTHER, RA ;
BLOW, DM .
ACTA CRYSTALLOGRAPHICA, 1967, 23 :544-&
[5]   CLONING OF GENES ENCODING EXTRACELLULAR METALLOPROTEASES FROM ERWINIA-CHRYSANTHEMI EC16 [J].
DAHLER, GS ;
BARRAS, F ;
KEEN, NT .
JOURNAL OF BACTERIOLOGY, 1990, 172 (10) :5803-5815
[6]  
DELEPELAIRE P, 1989, J BIOL CHEM, V264, P9083
[7]   SEQUENCE OF A CLUSTER OF GENES-CONTROLLING SYNTHESIS AND SECRETION OF ALKALINE PROTEASE IN PSEUDOMONAS-AERUGINOSA - RELATIONSHIPS TO OTHER SECRETORY PATHWAYS [J].
DUONG, F ;
LAZDUNSKI, A ;
CAMI, B ;
MURGIER, M .
GENE, 1992, 121 (01) :47-54
[8]   THE RHIZOBIUM NODULATION GENE NODO ENCODES A CA-2+-BINDING PROTEIN THAT IS EXPORTED WITHOUT N-TERMINAL CLEAVAGE AND IS HOMOLOGOUS TO HEMOLYSIN AND RELATED PROTEINS [J].
ECONOMOU, A ;
HAMILTON, WDO ;
JOHNSTON, AWB ;
DOWNIE, JA .
EMBO JOURNAL, 1990, 9 (02) :349-354
[9]   SECRETION OF CYCLOLYSIN, THE CALMODULIN-SENSITIVE ADENYLATE-CYCLASE HEMOLYSIN BIFUNCTIONAL PROTEIN OF BORDETELLA-PERTUSSIS [J].
GLASER, P ;
SAKAMOTO, H ;
BELLALOU, J ;
ULLMANN, A ;
DANCHIN, A .
EMBO JOURNAL, 1988, 7 (12) :3997-4004
[10]   REFINED 1.8 ANGSTROM X-RAY CRYSTAL-STRUCTURE OF ASTACIN, A ZINC-ENDOPEPTIDASE FROM THE CRAYFISH ASTACUS-ASTACUS L - STRUCTURE DETERMINATION, REFINEMENT, MOLECULAR-STRUCTURE AND COMPARISON WITH THERMOLYSIN [J].
GOMISRUTH, FX ;
STOCKER, W ;
HUBER, R ;
ZWILLING, R ;
BODE, W .
JOURNAL OF MOLECULAR BIOLOGY, 1993, 229 (04) :945-968