Genetic polymorphisms in miRNAs targeting the estrogen receptor and their effect on breast cancer risk

被引:12
作者
Nguyen-Dien, Giang T. [1 ,2 ]
Smith, Robert A. [1 ]
Haupt, Larisa M. [1 ]
Griffiths, Lyn R. [1 ]
Nguyen, Hue T. [2 ]
机构
[1] Queensland Univ Technol, Genom Res Ctr, Inst Hlth & Biomed Innovat, GPO Box 2434, Brisbane, Qld 4001, Australia
[2] Vietnam Natl Univ, Int Univ, Sch Biotechnol, Ho Chi Minh City, Vietnam
关键词
Breast cancer; miR-148a; miR-221; miR-186; miR-152; SNP;
D O I
10.1016/j.mgene.2014.01.002
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Breast cancer is the cancer that most commonly affects women worldwide. This type of cancer is genetically complex, but is strongly linked to steroid hormone signaling systems. Because microRNAs act as translational regulators of multiple genes, including the steroid nuclear receptors, single nucleotide polymorphisms (SNPs) in microRNA genes can have potentially wide-ranging influences on breast cancer development. Thus, this study was conducted to investigate the relationships between six SNPs (rs6977848, rs199981120, rs185641358, rs113054794, rs66461782, and rs12940701) located in four miRNA genes predicted to target the estrogen receptor (miR-148a, miR-221, miR-186, andmiR-152) and breast cancer risk in Caucasian Australian women. By using high resolutionmelt analysis (HRM) and polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP), 487 samples including 225 controls and 262 cases were genotyped. Analysis of their genotype and allele frequencies indicated that the differences between case and control populations were not significant for rs6977848, rs66461782, and rs12940701 because their p-values are 0.81, 0.93, and 0.1, respectively, which are all above the threshold value (p = 0.05). Our data thus suggests that these SNPs do not affect breast cancer risk in the tested population. In addition, rs199981120, rs185641358, and rs113054794 could not be found in this population, suggesting that these SNPs do not occur in Caucasian Australians. (C) 2014 The Authors. Published by Elsevier B.V.
引用
收藏
页码:226 / 236
页数:11
相关论文
共 23 条
[1]   Evaluation of SNPs in miR-146a, miR196a2 and miR-499 as Low-penetrance Alleles in German and Italian Familial Breast Cancer Cases [J].
Catucci, Irene ;
Yang, Rongxi ;
Verderio, Paolo ;
Pizzamiglio, Sara ;
Heesen, Ludwig ;
Hemminki, Kari ;
Sutter, Christian ;
Wappenschmidt, Barbara ;
Dick, Michelle ;
Arnold, Norbert ;
Bugert, Peter ;
Niederacher, Dieter ;
Meindl, Alfons ;
Schmutzler, Rita K. ;
Bartram, Claus C. ;
Ficarazzi, Filomena ;
Tizzoni, Laura ;
Zaffaroni, Daniela ;
Manoukian, Siranoush ;
Barile, Monica ;
Pierotti, Marco A. ;
Radice, Paolo ;
Burwinkel, Barbara ;
Peterlongo, Paolo .
HUMAN MUTATION, 2010, 31 (01) :E1052-E1057
[2]  
Ferlay J, 2010, IARC CANCERBASE
[3]   Most mammalian mRNAs are conserved targets of microRNAs [J].
Friedman, Robin C. ;
Farh, Kyle Kai-How ;
Burge, Christopher B. ;
Bartel, David P. .
GENOME RESEARCH, 2009, 19 (01) :92-105
[4]   Coordinate Regulation of FOXO1 by miR-27a, miR-96, and miR-182 in Breast Cancer Cells [J].
Guttilla, Irene K. ;
White, Bruce A. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (35) :23204-23216
[5]   MicroRNAs as Novel Biomarkers for Breast Cancer [J].
Heneghan, H. M. ;
Miller, N. ;
Lowery, A. J. ;
Sweeney, K. J. ;
Kerin, M. J. .
JOURNAL OF ONCOLOGY, 2010, 2010
[6]   Mir-17-5p regulates breast cancer cell proliferation by inhibiting translation of AIB1 mRNA [J].
Hossain, Anwar ;
Kuo, Macus T. ;
Saunders, Grady F. .
MOLECULAR AND CELLULAR BIOLOGY, 2006, 26 (21) :8191-8201
[7]   MicroRNA gene expression deregulation in human breast cancer [J].
Iorio, MV ;
Ferracin, M ;
Liu, CG ;
Veronese, A ;
Spizzo, R ;
Sabbioni, S ;
Magri, E ;
Pedriali, M ;
Fabbri, M ;
Campiglio, M ;
Ménard, S ;
Palazzo, JP ;
Rosenberg, A ;
Musiani, P ;
Volinia, S ;
Nenci, I ;
Calin, GA ;
Querzoli, P ;
Negrini, M ;
Croce, CM .
CANCER RESEARCH, 2005, 65 (16) :7065-7070
[8]  
Jackson Richard J, 2007, Sci STKE, V2007, pre1, DOI 10.1126/stke.3672007re1
[9]   Single nucleotide polymorphisms in miRNA binding sites and miRNA genes as breast/ovarian cancer risk modifiers in Jewish high-risk women [J].
Kontorovich, Tair ;
Levy, Asaf ;
Korostishevsky, Michael ;
Nir, Uri ;
Friedman, Eitan .
INTERNATIONAL JOURNAL OF CANCER, 2010, 127 (03) :589-597
[10]   MicroRNA expression profiles classify human cancers [J].
Lu, J ;
Getz, G ;
Miska, EA ;
Alvarez-Saavedra, E ;
Lamb, J ;
Peck, D ;
Sweet-Cordero, A ;
Ebet, BL ;
Mak, RH ;
Ferrando, AA ;
Downing, JR ;
Jacks, T ;
Horvitz, HR ;
Golub, TR .
NATURE, 2005, 435 (7043) :834-838