PROKARYOTIC MEMBERS OF A NEW FAMILY OF PUTATIVE HELICASES WITH SIMILARITY TO TRANSCRIPTION ACTIVATOR SNF2

被引:22
作者
KOLSTO, AB
BORK, P
KVALOY, K
LINDBACK, T
GRONSTADT, A
KRISTENSEN, T
SANDER, C
机构
[1] UNIV OSLO, CTR BIOTECHNOL, N-0137 OSLO 3, NORWAY
[2] EUROPEAN MOLEC BIOL LAB, W-6900 HEIDELBERG, GERMANY
关键词
HOMOLOGY; HELICASES; SNF2; FAMILY; BACILLUS-CEREUS; TRANSCRIPTION REGULATION;
D O I
10.1006/jmbi.1993.1185
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cloning and sequence analysis of a new open reading frame from Bacillus cereus reveals the relationship to a recently identified family of putative eukaryotic transcription activators similar to the yeast SNF2 gene product. As a result of comparative analysis of sequence features conserved in all members of this family, a gene from a chilo iridescent virus, as well as a putative helicase from Escherichia coli (hepA), can also be grouped into this family. The unexpected presence of prokaryotic and viral sequences in the previously purely eukaryotic SNF2 family suggests a defined subgroup of DNA helicases present in all species, with specific function in transcription activation. © 1993 Academic Press, Inc.
引用
收藏
页码:684 / 688
页数:5
相关论文
共 28 条
[1]   PROSITE - A DICTIONARY OF SITES AND PATTERNS IN PROTEINS [J].
BAIROCH, A .
NUCLEIC ACIDS RESEARCH, 1992, 20 :2013-2018
[2]   RECOGNITION OF DIFFERENT NUCLEOTIDE-BINDING SITES IN PRIMARY STRUCTURES USING A PROPERTY-PATTERN APPROACH [J].
BORK, P ;
GRUNWALD, C .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1990, 191 (02) :347-358
[3]   COMPREHENSIVE SEQUENCE-ANALYSIS OF THE 182 PREDICTED OPEN READING FRAMES OF YEAST CHROMOSOME-III [J].
BORK, P ;
OUZOUNIS, C ;
SANDER, C ;
SCHARF, M ;
SCHNEIDER, R ;
SONNHAMMER, E .
PROTEIN SCIENCE, 1992, 1 (12) :1677-1690
[4]  
BORK P, 1993, IN PRESS NUCL ACIDS, V21
[5]   PHYSICAL MAPS OF THE GENOMES OF 3 BACILLUS-CEREUS STRAINS [J].
CARLSON, CR ;
GRONSTAD, A ;
KOLSTO, AB .
JOURNAL OF BACTERIOLOGY, 1992, 174 (11) :3750-3756
[6]   IDENTIFICATION OF A SACCHAROMYCES-CEREVISIAE HOMOLOG OF THE SNF2 TRANSCRIPTIONAL REGULATOR IN THE DNA-SEQUENCE OF AN 8.6 KB REGION IN THE LTE1-CYS1 INTERVAL ON THE LEFT ARM OF CHROMOSOME-I [J].
CLARK, MW ;
ZHONG, WW ;
KENG, T ;
STORMS, RK ;
BARTON, A ;
KABACK, DB ;
BUSSEY, H .
YEAST, 1992, 8 (02) :133-145
[7]   A PRESUMPTIVE HELICASE (MOT1 GENE-PRODUCT) AFFECTS GENE-EXPRESSION AND IS REQUIRED FOR VIABILITY IN THE YEAST SACCHAROMYCES-CEREVISIAE [J].
DAVIS, JL ;
KUNISAWA, R ;
THORNER, J .
MOLECULAR AND CELLULAR BIOLOGY, 1992, 12 (04) :1879-1892
[8]   A COMPREHENSIVE SET OF SEQUENCE-ANALYSIS PROGRAMS FOR THE VAX [J].
DEVEREUX, J ;
HAEBERLI, P ;
SMITHIES, O .
NUCLEIC ACIDS RESEARCH, 1984, 12 (01) :387-395
[9]   SEQUENCE OF RAD54, A SACCHAROMYCES-CEREVISIAE GENE INVOLVED IN RECOMBINATION AND REPAIR [J].
EMERY, HS ;
SCHILD, D ;
KELLOGG, DE ;
MORTIMER, RK .
GENE, 1991, 104 (01) :103-106
[10]   CHROMOSOME TANGLING AND BREAKAGE AT ANAPHASE RESULT FROM MUTATIONS IN LODESTAR, A DROSOPHILA GENE ENCODING A PUTATIVE NUCLEOSIDE TRIPHOSPHATE-BINDING PROTEIN [J].
GIRDHAM, CH ;
GLOVER, DM .
GENES & DEVELOPMENT, 1991, 5 (10) :1786-1799