First-principles study of the formation of glycine-producing radicals from common interstellar species

被引:23
作者
Sato, Akimasa [1 ]
Kitazawa, Yuya [1 ]
Ochi, Toshiro [1 ]
Shoji, Mitsuo [2 ]
Komatsu, Yu [1 ,3 ]
Kayanuma, Megumi [2 ]
Aikawa, Yuri [4 ]
Umemura, Masayuki [2 ]
Shigeta, Yasuteru [2 ]
机构
[1] Univ Tsukuba, Grad Sch Pure & Appl Sci, Ibaraki 3058571, Japan
[2] Univ Tsukuba, Ctr Computat Sci, Ibaraki 3058577, Japan
[3] NINS, Astrobiol Ctr, 2-21-1 Osawa, Mitaka, Tokyo 1818588, Japan
[4] Univ Tokyo, Grad Sch Sci, Dept Astron, Tokyo 1130033, Japan
关键词
Density functional theory; Origin; Amino acid; ISM; Chemical reaction; Reaction mechanism;
D O I
10.1016/j.molap.2018.01.002
中图分类号
P1 [天文学];
学科分类号
0704 ;
摘要
Glycine, the simplest amino acid, has been intensively searched for in molecular clouds, and the comprehensive clarification of the formation path of interstellar glycine is now imperative. Among all the possible glycine formation pathways, we focused on the radical pathways revealed by Garrod (2013). In the present study, we have precisely investigated all the chemical reaction steps related to the glycine formation processes based on state-of-the-art density functional theory (DFT) calculations. We found that two reaction pathways require small activation barriers (Delta E-double dagger <= 7.75 kJ mol(-1)), which demonstrates the possibility of glycine formation even at low temperatures in interstellar space if the radical species are generated. The origin of carbon and nitrogen in the glycine backbone and their combination patterns are further discussed in relation to the formation mechanisms. According to the clarification of the atomic correspondence between glycine and its potential parental molecules, it is shown that the nitrogen and two carbons in the glycine can originate in three common interstellar molecules, methanol, hydrogen cyanide, and ammonia, and that the source molecules of glycine can be described by any of their combinations. The glycine formation processes can be categorized into six patterns. Finally, we discussed two other glycine formation pathways expected from the present DFT calculation results. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:11 / 19
页数:9
相关论文
共 51 条
[1]   The reaction mechanism of sarcosine oxidase elucidated using FMO and QM/MM methods [J].
Abe, Yukihiro ;
Shoji, Mitsuo ;
Nishiya, Yoshiaki ;
Aiba, Hiroshi ;
Kishimoto, Takahide ;
Kitaura, Kazuo .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2017, 19 (15) :9811-9822
[2]   Prebiotic chemicals-amino acid and phosphorus-in the coma of comet 67P/Churyumov-Gerasimenko [J].
Altwegg, Kathrin ;
Balsiger, Hans ;
Bar-Nun, Akiva ;
Berthelier, Jean-Jacques ;
Bieler, Andre ;
Bochsler, Peter ;
Briois, Christelle ;
Calmonte, Ursina ;
Combi, Michael R. ;
Cottin, Herve ;
De Keyser, Johan ;
Dhooghe, Frederik ;
Fiethe, Bjorn ;
Fuselier, Stephen A. ;
Gasc, Sebastien ;
Gombosi, Tamas I. ;
Hansen, Kenneth C. ;
Haessig, Myrtha ;
Jackel, Annette ;
Kopp, Ernest ;
Korth, Axel ;
Le Roy, Lena ;
Mall, Urs ;
Marty, Bernard ;
Mousis, Olivier ;
Owen, Tobias ;
Reme, Henri ;
Rubin, Martin ;
Semon, Thierry ;
Tzou, Chia-Yu ;
Waite, James Hunter ;
Wurz, Peter .
SCIENCE ADVANCES, 2016, 2 (05)
[3]   Detection of amino acetonitrile in Sgr B2(N) [J].
Belloche, A. ;
Menten, K. M. ;
Comito, C. ;
Mueller, H. S. P. ;
Schilke, P. ;
Ott, J. ;
Thorwirth, S. ;
Hieret, C. .
ASTRONOMY & ASTROPHYSICS, 2008, 482 (01) :179-U37
[4]   Complex organic molecules in the interstellar medium: IRAM 30 m line survey of Sagittarius B2(N) and (M) [J].
Belloche, A. ;
Mueller, H. S. P. ;
Menten, K. M. ;
Schilke, P. ;
Comito, C. .
ASTRONOMY & ASTROPHYSICS, 2013, 559
[5]   Racemic amino acids from the ultraviolet photolysis of interstellar ice analogues [J].
Bernstein, MP ;
Dworkin, JP ;
Sandford, SA ;
Cooper, GW ;
Allamandola, LJ .
NATURE, 2002, 416 (6879) :401-403
[6]   Amino acids from ultraviolet irradiation of interstellar ice analogues [J].
Caro, GMM ;
Meierhenrich, UJ ;
Schutte, WA ;
Barbier, B ;
Segovia, AA ;
Rosenbauer, H ;
Thiemann, WHP ;
Brack, A ;
Greenberg, JM .
NATURE, 2002, 416 (6879) :403-406
[7]   COMETARY DELIVERY OF ORGANIC-MOLECULES TO THE EARLY EARTH [J].
CHYBA, CF ;
THOMAS, PJ ;
BROOKSHAW, L ;
SAGAN, C .
SCIENCE, 1990, 249 (4967) :366-373
[8]   Detection of glycolaldehyde toward the solar-type protostar NGC 1333 IRAS2A [J].
Coutens, A. ;
Persson, M. V. ;
Jorgensen, J. K. ;
Wampfler, S. F. ;
Lykke, J. M. .
ASTRONOMY & ASTROPHYSICS, 2015, 576
[9]   AMINO ACID ANALYSES OF MURCHISON, MURRAY, AND ALLENDE CARBONACEOUS CHONDRITES [J].
CRONIN, JR ;
MOORE, CB .
SCIENCE, 1971, 172 (3990) :1327-&
[10]   The Kinetic Monte Carlo Method as a Way To Solve the Master Equation for Interstellar Grain Chemistry [J].
Cuppen, H. M. ;
Karssemeijer, L. J. ;
Lamberts, T. .
CHEMICAL REVIEWS, 2013, 113 (12) :8840-8871