Whole-Genome Shotgun Sequence of the Keratinolytic Bacterium Lysobacter sp. A03, Isolated from the Antarctic Environment

被引:4
作者
Pereira, Jamile Queiroz [1 ,2 ]
Ambrosini, Adriana [1 ]
Sant'Anna, Fernando Hayashi [1 ]
Tadra-Sfeir, Michele [3 ]
Faoro, Helisson [3 ]
Pedrosa, Fabio Oliveira [3 ]
Souza, Emanuel Maltempi [3 ]
Brandelli, Adriano [2 ]
Passaglia, Luciane M. P. [1 ]
机构
[1] Univ Fed Rio Grande do Sul, Inst Biociencias, Dept Genet, Porto Alegre, RS, Brazil
[2] Univ Fed Rio Grande do Sul, ICTA, Porto Alegre, RS, Brazil
[3] Univ Fed Parana UFPR, Dept Bioquim & Biol Mol, Curitiba, PR, Brazil
关键词
D O I
10.1128/genomeA.00246-15
中图分类号
学科分类号
摘要
Lysobacter sp. strain A03 is a protease-producing bacterium isolated from decomposing-penguin feathers collected in the Antarctic environment. This strain has the ability to degrade keratin at low temperatures. The A03 genome sequence provides the possibility of finding new genes with biotechnological potential to better understand its cold-adaptation mechanism and survival in cold environments.
引用
收藏
页数:2
相关论文
共 8 条
  • [1] The RAST server: Rapid annotations using subsystems technology
    Aziz, Ramy K.
    Bartels, Daniela
    Best, Aaron A.
    DeJongh, Matthew
    Disz, Terrence
    Edwards, Robert A.
    Formsma, Kevin
    Gerdes, Svetlana
    Glass, Elizabeth M.
    Kubal, Michael
    Meyer, Folker
    Olsen, Gary J.
    Olson, Robert
    Osterman, Andrei L.
    Overbeek, Ross A.
    McNeil, Leslie K.
    Paarmann, Daniel
    Paczian, Tobias
    Parrello, Bruce
    Pusch, Gordon D.
    Reich, Claudia
    Stevens, Rick
    Vassieva, Olga
    Vonstein, Veronika
    Wilke, Andreas
    Zagnitko, Olga
    [J]. BMC GENOMICS, 2008, 9 (1)
  • [2] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
    Bankevich, Anton
    Nurk, Sergey
    Antipov, Dmitry
    Gurevich, Alexey A.
    Dvorkin, Mikhail
    Kulikov, Alexander S.
    Lesin, Valery M.
    Nikolenko, Sergey I.
    Son Pham
    Prjibelski, Andrey D.
    Pyshkin, Alexey V.
    Sirotkin, Alexander V.
    Vyahhi, Nikolay
    Tesler, Glenn
    Alekseyev, Max A.
    Pevzner, Pavel A.
    [J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) : 455 - 477
  • [3] LYSOBACTER, A NEW GENUS OF NON-FRUITING, GLIDING BACTERIA WITH A HIGH BASE RATIO
    CHRISTENSEN, P
    COOK, FD
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1978, 28 (03): : 367 - 393
  • [4] A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data
    Coil, David
    Jospin, Guillaume
    Darling, Aaron E.
    [J]. BIOINFORMATICS, 2015, 31 (04) : 587 - 589
  • [5] CISA: Contig Integrator for Sequence Assembly of Bacterial Genomes
    Lin, Shin-Hung
    Liao, Yu-Chieh
    [J]. PLOS ONE, 2013, 8 (03):
  • [6] Parks DH, 2014, PEERJ PREPRINTS, V2, DOI DOI 10.7287/PEERJ.PREPRINTS.554V1
  • [7] Isolation of three novel Antarctic psychrotolerant feather-degrading bacteria and partial purification of keratinolytic enzyme from Lysobacter sp A03
    Pereira, Jamile Queiroz
    Lopes, Fernanda Cortez
    Petry, Maria Virginia
    da Costa Medina, Luis Fernando
    Brandelli, Adriano
    [J]. INTERNATIONAL BIODETERIORATION & BIODEGRADATION, 2014, 88 : 1 - 7
  • [8] Draft Genome Sequence of Antagonistic Agent Lysobacter antibioticus 13-6
    Zhou, Lihong
    Li, Miao
    Yang, Jun
    Wei, Lanfang
    Ji, Guanghai
    [J]. GENOME ANNOUNCEMENTS, 2014, 2 (05)