PARALLEL ANALYSIS OF OLIGODEOXYRIBONUCLEOTIDE (OLIGONUCLEOTIDE) INTERACTIONS .1. ANALYSIS OF FACTORS INFLUENCING OLIGONUCLEOTIDE DUPLEX FORMATION

被引:94
作者
MASKOS, U
SOUTHERN, EM
机构
[1] Department of Biochemistry, University of Oxford, Oxford OX1 3QU, South Parks Road
关键词
D O I
10.1093/nar/20.7.1675
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A novel method for the analysis of oligonucleotide - oligonucleotide interactions is described. Oligonucleotides of different sequence are synthesised in situ as stripes on the surface of a glass slide (see accompanying paper). Multiple hybridisations are then carried out on each oligonucleotide simultaneously to determine the dependence of oligonucleotide duplex formation on duplex length, base composition, hybridisation solvent and sequence complexity.
引用
收藏
页码:1675 / 1678
页数:4
相关论文
共 16 条
[1]   NOVEL ACTIVATING AND CAPPING REAGENTS FOR IMPROVED HYDROGEN-PHOSPHONATE DNA-SYNTHESIS [J].
ANDRUS, A ;
EFCAVITCH, JW ;
MCBRIDE, LJ ;
GIUSTI, B .
TETRAHEDRON LETTERS, 1988, 29 (08) :861-864
[2]   SYNTHESIS AND PROPERTIES OF OLIGONUCLEOTIDE-CELLULOSE COLUMNS [J].
ASTELL, CR ;
SMITH, M .
BIOCHEMISTRY, 1972, 11 (22) :4114-&
[3]   EFFECTS OF MICROSCOPIC AND MACROSCOPIC VISCOSITY ON RATE OF RENATURATION OF DNA [J].
CHANG, CT ;
HAIN, TC ;
HUTTON, JR ;
WETMUR, JG .
BIOPOLYMERS, 1974, 13 (09) :1847-1858
[4]   THE THERMAL-STABILITY OF OLIGONUCLEOTIDE DUPLEXES IS SEQUENCE INDEPENDENT IN TETRAALKYLAMMONIUM SALT-SOLUTIONS - APPLICATION TO IDENTIFYING RECOMBINANT DNA CLONES [J].
JACOBS, KA ;
RUDERSDORF, R ;
NEILL, SD ;
DOUGHERTY, JP ;
BROWN, EL ;
FRITSCH, EF .
NUCLEIC ACIDS RESEARCH, 1988, 16 (10) :4637-4650
[5]  
Maniatis T., 1982, MOL CLONING
[6]  
MASKOS U, UNPUB
[7]   ALTERATION OF RELATIVE STABILITY OF DA-DT AND DG-DC BASE PAIRS IN DNA [J].
MELCHIOR, WB ;
VONHIPPE.PH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1973, 70 (02) :298-302
[8]   DNA MELTING TEMPERATURES AND RENATURATION RATES IN CONCENTRATED ALKYLAMMONIUM SALT-SOLUTIONS [J].
OROSZ, JM ;
WETMUR, JG .
BIOPOLYMERS, 1977, 16 (06) :1183-1199
[9]   GENETIC-ANALYSIS OF AMPLIFIED DNA WITH IMMOBILIZED SEQUENCE-SPECIFIC OLIGONUCLEOTIDE PROBES [J].
SAIKI, RK ;
WALSH, PS ;
LEVENSON, CH ;
ERLICH, HA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (16) :6230-6234
[10]   PRIMER-DIRECTED ENZYMATIC AMPLIFICATION OF DNA WITH A THERMOSTABLE DNA-POLYMERASE [J].
SAIKI, RK ;
GELFAND, DH ;
STOFFEL, S ;
SCHARF, SJ ;
HIGUCHI, R ;
HORN, GT ;
MULLIS, KB ;
ERLICH, HA .
SCIENCE, 1988, 239 (4839) :487-491