ISOTHERMAL, INVITRO AMPLIFICATION OF NUCLEIC-ACIDS BY A MULTIENZYME REACTION MODELED AFTER RETROVIRAL REPLICATION

被引:394
作者
GUATELLI, JC
WHITFIELD, KM
KWOH, DY
BARRINGER, KJ
RICHMAN, DD
GINGERAS, TR
机构
[1] SALK INST BIOTECHNOL,IND ASSOCIATES INC,LA JOLLA,CA 92037
[2] UNIV CALIF SAN DIEGO,SCH MED,DEPT MED,SAN DIEGO,CA 92103
[3] UNIV CALIF SAN DIEGO,SCH MED,DEPT PATHOL,SAN DIEGO,CA 92103
[4] VET ADM MED CTR,SAN DIEGO,CA 92161
关键词
reserve transcriptase; RNase H; T7 RNA polymerase;
D O I
10.1073/pnas.87.5.1874
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A target nucleic acid sequence can be replicated (amplified) exponentially in vitro under isothermal conditions by using three enzymatic activities essential to retroviral replication: reverse transcriptase, RNase H, and a DNA-dependent RNA polymerase. By mimicking the retroviral strategy of RNA replication by means of cDNA intermediates, this reaction accumulates cDNA and RNA copies of the original target. Product accumulation is exponential with respect to time, indicating that newly synthesized cDNAs and RNAs function as templates for a continuous series of transcription and reverse transcription reactions. Ten million-fold amplification occurs after a 1- to 2-hr incubation, with an initial rate of amplification of 10-fold every 2.5 min. This self-sustained sequence replication system is useful for the detection and nucleotide sequence analysis of rare RNAs and DNAs. The analogy to aspects of retroviral replication is discussed.
引用
收藏
页码:1874 / 1878
页数:5
相关论文
共 26 条
[1]  
DALESSIO JM, 1988, NUCLEIC ACIDS RES, V16, P1999
[2]   COVALENT ATTACHMENT OF OLIGONUCLEOTIDES TO SOLID SUPPORTS [J].
GHOSH, SS ;
MUSSO, GF .
NUCLEIC ACIDS RESEARCH, 1987, 15 (13) :5353-5372
[3]   DETAILED MODEL OF REVERSE TRANSCRIPTION AND TESTS OF CRUCIAL ASPECTS [J].
GILBOA, E ;
MITRA, SW ;
GOFF, S ;
BALTIMORE, D .
CELL, 1979, 18 (01) :93-100
[4]  
GRANDGENETT DP, 1974, J BIOL CHEM, V249, P5148
[5]   DETECTION OF LYMPHOCYTES EXPRESSING HUMAN LYMPHOTROPIC-T VIRUS TYPE-III IN LYMPH-NODES AND PERIPHERAL-BLOOD FROM INFECTED INDIVIDUALS BY INSITU HYBRIDIZATION [J].
HARPER, ME ;
MARSELLE, LM ;
GALLO, RC ;
WONGSTAAL, F .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (03) :772-776
[6]   DEGRADATION OF DNA RNA HYBRIDS BY RIBONUCLEASE-H AND DNA POLYMERASES OF CELLULAR AND VIRAL ORIGIN [J].
KELLER, W ;
CROUCH, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1972, 69 (11) :3360-&
[7]   CELL KILLING BY SPLEEN NECROSIS VIRUS IS CORRELATED WITH A TRANSIENT ACCUMULATION OF SPLEEN NECROSIS VIRUS-DNA [J].
KESHET, E ;
TEMIN, HM .
JOURNAL OF VIROLOGY, 1979, 31 (02) :376-388
[8]   RIBONUCLEASE-H ACTIVITIES ASSOCIATED WITH VIRAL REVERSE TRANSCRIPTASES ARE ENDONUCLEASES [J].
KRUG, MS ;
BERGER, SL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (10) :3539-3543
[9]   TRANSCRIPTION-BASED AMPLIFICATION SYSTEM AND DETECTION OF AMPLIFIED HUMAN IMMUNODEFICIENCY VIRUS TYPE-1 WITH A BEAD-BASED SANDWICH HYBRIDIZATION FORMAT [J].
KWOH, DY ;
DAVIS, GR ;
WHITFIELD, KM ;
CHAPPELLE, HL ;
DIMICHELE, LJ ;
GINGERAS, TR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (04) :1173-1177
[10]   RNA-DEPENDENT DNA POLYMERASE-ACTIVITY OF RNA TUMOR-VIRUSES .5. MECHANISM OF ACTION OF RIBONUCLEASE H ISOLATED FROM AVIAN MYELOBLASTOSIS VIRUS AND ESCHERICHIA-COLI [J].
LEIS, JP ;
BERKOWER, I ;
HURWITZ, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1973, 70 (02) :466-470