A NEW 3D HN(CA)HA EXPERIMENT FOR OBTAINING FINGERPRINT H(N)-H-ALPHA CROSS PEAKS IN N-15-LABELED AND C-13-LABELED PROTEINS

被引:88
作者
CLUBB, RT
THANABAL, V
WAGNER, G
机构
[1] HARVARD UNIV,SCH MED,DEPT BIOL CHEM & MOLEC PHARMACOL,240 LONGWOOD AVE,BOSTON,MA 02115
[2] UNIV MICHIGAN,DEPT BIOL CHEM,ANN ARBOR,MI 48109
关键词
3D NMR; J-CONNECTIVITY; RESONANCE ASSIGNMENT; ISOTOPE LABELING; PROTEINS; T4; LYSOZYME;
D O I
10.1007/BF01875531
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A new 3D H-1-N-15-C-13 triple resonance experiment is presented that provides in-phase absorptive cross peaks between amide protons and alpha-protons of the same and the sequentially preceding residue. The experiment yields similar connectivities as those described previously by Montelione and Wagner (1990a) [J. Magn. Reson., 87, 183-188] and Kay et al. (1991) [J. Magn. Reson., 91, 84-92]. However, the pulse sequence was designed to minimize the time that transverse coherence of the C-13(alpha) nucleus is present, since this nucleus has the shortest transverse relaxation time of all the nuclei involved in these experiments. This is achieved by using a coherence transfer pathway from H-1(N) to N-15, C-13(alpha), H-1(alpha) and back to the H-1(N). In the sequence described, transverse C-13(alpha) coherence is present only for a length of ca. I/1J(C(alpha)-H(alpha). This reduces loss of signal due to transverse relaxation. We tested the technique on uniformly N-15- and C-13-enriched T4 lysozyme.
引用
收藏
页码:203 / 210
页数:8
相关论文
共 24 条
[1]   COMPARISON OF DIFFERENT MODES OF 2-DIMENSIONAL REVERSE-CORRELATION NMR FOR THE STUDY OF PROTEINS [J].
BAX, A ;
IKURA, M ;
KAY, LE ;
TORCHIA, DA ;
TSCHUDIN, R .
JOURNAL OF MAGNETIC RESONANCE, 1990, 86 (02) :304-318
[2]  
BAX A, 1985, J MAGN RESON, V65, P335
[3]   COHERENCE TRANSFER BY ISOTROPIC MIXING - APPLICATION TO PROTON CORRELATION SPECTROSCOPY [J].
BRAUNSCHWEILER, L ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1983, 53 (03) :521-528
[4]   NET POLARIZATION TRANSFER VIA A J-ORDERED STATE FOR SIGNAL ENHANCEMENT OF LOW-SENSITIVITY NUCLEI [J].
BURUM, DP ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1980, 39 (01) :163-168
[5]  
BYSTROV VF, 1976, PROGR NMR SPECTROSCO, V10, P41
[6]   HETERONUCLEAR 3-DIMENSIONAL NMR-SPECTROSCOPY - A STRATEGY FOR THE SIMPLIFICATION OF HOMONUCLEAR TWO-DIMENSIONAL NMR-SPECTRA [J].
FESIK, SW ;
ZUIDERWEG, ERP .
JOURNAL OF MAGNETIC RESONANCE, 1988, 78 (03) :588-593
[7]   A NOVEL-APPROACH FOR SEQUENTIAL ASSIGNMENT OF H-1, C-13, AND N-15 SPECTRA OF LARGER PROTEINS - HETERONUCLEAR TRIPLE-RESONANCE 3-DIMENSIONAL NMR-SPECTROSCOPY - APPLICATION TO CALMODULIN [J].
IKURA, M ;
KAY, LE ;
BAX, A .
BIOCHEMISTRY, 1990, 29 (19) :4659-4667
[8]   THE DESIGN AND OPTIMIZATION OF COMPLEX NMR EXPERIMENTS APPLICATION TO A TRIPLE-RESONANCE PULSE SCHHEME CORRELATING H-ALPHA, NH, AND N-15 CHEMICAL-SHIFTS IN N-15-C-13-LABELED PROTEINS [J].
KAY, LE ;
IKURA, M ;
BAX, A .
JOURNAL OF MAGNETIC RESONANCE, 1991, 91 (01) :84-92
[9]   STUDIES OF J-CONNECTIVITIES AND SELECTIVE H-1-H-1 OVERHAUSER EFFECTS IN H2O SOLUTIONS OF BIOLOGICAL MACROMOLECULES BY TWO-DIMENSIONAL NMR EXPERIMENTS [J].
KUMAR, A ;
WAGNER, G ;
ERNST, RR ;
WUTHRICH, K .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1980, 96 (03) :1156-1163
[10]   APPLICATION OF PHASE SENSITIVE TWO-DIMENSIONAL CORRELATED SPECTROSCOPY (COSY) FOR MEASUREMENTS OF H-1-H-1 SPIN-SPIN COUPLING-CONSTANTS IN PROTEINS [J].
MARION, D ;
WUTHRICH, K .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1983, 113 (03) :967-974