ABOUT THE ORDER OF DIVERGENCE OF THE MAJOR BACTERIAL TAXA DURING EVOLUTION

被引：50

作者：

VANDEPEER, Y

NEEFS, JM

DERIJK, P

DEVOS, P

DEWACHTER, R

机构：

[1] UNIV INSTELLING ANTWERP,DEPT BIOCHEM,UNIV PLEIN 1,B-2610 WILRIJK,BELGIUM

[2] STATE UNIV GHENT,MICROBIOL LAB,B-9000 GHENT,BELGIUM

来源：

SYSTEMATIC AND APPLIED MICROBIOLOGY | 1994年 / 17卷 / 01期

关键词：

BACTERIAL PHYLOGENY; RIBOSOMAL RNA; DATA RESAMPLING; NEIGHBOR-JOINING; PHYLOGENETIC TREE;

D O I：

10.1016/S0723-2020(11)80028-7

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

An evolutionary tree, reconstructed from 1232 bacterial small ribosomal subunit RNA sequences by a distance method, reflects the existence of 11 divisions and a number of subdivisions originally recognized by Woese and collaborators. However, the order of divergence that gave rise to these taxa remains indeterminate and the division of Gram positives and relatives does not behave as a monophyletic taxon. Analysis of the data by a novel approach led to a preferred order of divergence for 10 out of 16 tree nodes, but the Gram positives still behaved as biphyletic.

引用

页码：32 / 38

页数：7

共 33 条

[1] BOTH B, 1991, FEMS MICROBIOL LETT, V78, P53
[2] COMPILATION OF SMALL RIBOSOMAL-SUBUNIT RNA SEQUENCES
DERIJK, P
NEEFS, JM
VANDEPEER, Y
DEWACHTER, R
[J]. NUCLEIC ACIDS RESEARCH, 1992, 20 : 2075 - 2089
[3] A LEAST-SQUARES ALGORITHM FOR FITTING ADDITIVE TREES TO PROXIMITY DATA
DESOETE, G
[J]. PSYCHOMETRIKA, 1983, 48 (04) : 621 - 626
[4] FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[5] COMPARATIVE CATALOGING OF 16S RIBOSOMAL RIBONUCLEIC-ACID - MOLECULAR APPROACH TO PROCARYOTIC SYSTEMATICS
FOX, GE
PECHMAN, KR
WOESE, CR
[J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1977, 27 (01): : 44 - 57
[6] THE EVOLUTIONARY POSITION OF THE RHODOPHYTE PORPHYRA-UMBILICALIS AND THE BASIDIOMYCETE LEUCOSPORIDIUM-SCOTTII AMONG OTHER EUKARYOTES AS DEDUCED FROM COMPLETE SEQUENCES OF SMALL RIBOSOMAL-SUBUNIT RNA
HENDRIKS, L
DEBAERE, R
VANDEPEER, Y
NEEFS, J
GORIS, A
DEWACHTER, R
[J]. JOURNAL OF MOLECULAR EVOLUTION, 1991, 32 (02) : 167 - 177
[7] THE 23S RIBOSOMAL-RNA HIGHER-ORDER STRUCTURE OF PSEUDOMONAS-CEPACIA AND OTHER PROKARYOTES
HOPFL, P
LUDWIG, W
SCHLEIFER, KH
LARSEN, N
[J]. EUROPEAN JOURNAL OF BIOCHEMISTRY, 1989, 185 (02): : 355 - 364
[8] JUKES T H, 1969, P21
[9] EVOLUTION OF THE GLUTAMINE-SYNTHETASE GENE, ONE OF THE OLDEST EXISTING AND FUNCTIONING GENES
KUMADA, Y
BENSON, DR
HILLEMANN, D
HOSTED, TJ
ROCHEFORT, DA
THOMPSON, CJ
WOHLLEBEN, W
TATENO, Y
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (07) : 3009 - 3013
[10] THE INFLUENCE OF TACHYTELICALLY (RAPIDLY) EVOLVING SEQUENCES ON THE TOPOLOGY OF PHYLOGENETIC TREES - INTRAFAMILY RELATIONSHIPS AND THE PHYLOGENETIC POSITION OF PLANCTOMYCETACEAE AS REVEALED BY COMPARATIVE-ANALYSIS OF 16S RIBOSOMAL-RNA SEQUENCES
LIESACK, W
SOLLER, R
STEWART, T
HAAS, H
GIOVANNONI, S
STACKEBRANDT, E
[J]. SYSTEMATIC AND APPLIED MICROBIOLOGY, 1992, 15 (03) : 357 - 362

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