Two-Step Concentration of Complex Water Samples for the Detection of Viruses

被引:22
作者
Farkas, Kata [1 ]
McDonald, James E. [1 ]
Malham, Shelagh K. [2 ]
Jones, Davey L. [1 ,3 ]
机构
[1] Bangor Univ, Sch Nat Sci, Bangor LL57 2UW, Gwynedd, Wales
[2] Bangor Univ, Sch Ocean Sci, Menai Bridge LL59 5AB, Gwynedd, Wales
[3] Univ Western Australia, UWA Sch Agr & Environm, Crawley, WA 6009, Australia
基金
英国自然环境研究理事会;
关键词
tangential flow ultrafiltration; virus precipitation; qPCR; enteric viruses; norovirus; mengovirus;
D O I
10.3390/mps1030035
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The accurate detection and quantification of pathogenic viruses in water is essential to understand and reduce the risk of human infection. This paper describes a two-step method suitable for concentrating viruses in water and wastewater samples. The method involves a tangential flow ultrafiltration step that reduces the sample volume of 1-10 L to approximately 50 mL, followed by secondary precipitation using polyethylene glycol 6000, which reduces the volume to 1-4 mL. For method validation, water samples were spiked with different concentrations of enteric viruses, and viral recovery in the concentrates exceeded 10% in all experiments. The method is suitable for water samples with high and low salinity and turbidity, allowing an accurate comparison of viral titers in a diverse range of water types. Furthermore, the method has the potential to concentrate other pathogens, e.g., bacteria or protozoa. Hence, the use of this method can improve the holistic assessment of risks associated with wastewater-contaminated environments.
引用
收藏
页码:1 / 6
页数:6
相关论文
共 11 条
[1]   Methods for primary concentration of viruses from water samples: a review and meta-analysis of recent studies [J].
Cashdollar, J. L. ;
Wymer, L. .
JOURNAL OF APPLIED MICROBIOLOGY, 2013, 115 (01) :1-11
[2]   Seasonal and spatial dynamics of enteric viruses in wastewater and in riverine and estuarine receiving waters [J].
Farkas, Kata ;
Cooper, David M. ;
McDonald, James E. ;
Malham, Shelagh K. ;
de Rougemont, Alexis ;
Jones, Davey L. .
SCIENCE OF THE TOTAL ENVIRONMENT, 2018, 634 :1174-1183
[3]  
Hassard F, 2016, FRONT MICROBIOL, V7, DOI [10.3389/fmicb.2016.01692, 10.3389/fmicb.2017.00053]
[4]   Multistate evaluation of an ultrafiltration-based procedure for simultaneous recovery of enteric microbes in 100-liter tap water samples [J].
Hill, Vincent R. ;
Kahler, Amy M. ;
Jothikumar, Narayanan ;
Johnson, Trisha B. ;
Hahn, Donghyun ;
Cromeans, Theresa L. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (13) :4218-4225
[5]   Development of a rapid method for simultaneous recovery of diverse microbes in drinking water by ultrafiltration with sodium polyphosphate and surfactants [J].
Hill, VR ;
Polaczyk, AL ;
Hahn, D ;
Narayanan, J ;
Cromeans, TL ;
Roberts, JM ;
Amburgey, JE .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (11) :6878-6884
[6]   Evaluation of ultrafiltration cartridges for a water sampling apparatus [J].
Holowecky, P. M. ;
James, R. R. ;
Lorch, D. P. ;
Straka, S. E. ;
Lindquist, H. D. A. .
JOURNAL OF APPLIED MICROBIOLOGY, 2009, 106 (03) :738-747
[7]   Concentration and Recovery of Viruses from Water: A Comprehensive Review [J].
Ikner, Luisa A. ;
Gerba, Charles P. ;
Bright, Kelly R. .
FOOD AND ENVIRONMENTAL VIROLOGY, 2012, 4 (02) :41-67
[8]   Evaluation of an Ultrafiltration-Based Procedure for Simultaneous Recovery of Diverse Microbes in Source Waters [J].
Kahler, Amy M. ;
Johnson, Trisha B. ;
Hahn, Donghyun ;
Narayanan, Jothikumar ;
Derado, Gordana ;
Hill, Vincent R. .
WATER, 2015, 7 (03) :1202-1216
[9]   POLYETHYLENE-GLYCOL PRECIPITATION FOR RECOVERY OF PATHOGENIC VIRUSES, INCLUDING HEPATITIS-A VIRUS AND HUMAN ROTAVIRUS, FROM OYSTER, WATER, AND SEDIMENT SAMPLES [J].
LEWIS, GD ;
METCALF, TG .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1988, 54 (08) :1983-1988
[10]   Evaluation of hollow-fiber ultrafiltration primary concentration of pathogens and secondary concentration of viruses from water [J].
Rhodes, Eric R. ;
Hamilton, Douglas W. ;
See, Mary Jean ;
Wymer, Larry .
JOURNAL OF VIROLOGICAL METHODS, 2011, 176 (1-2) :38-45