NAVIGATOR - TOOLS FOR INFORMAL STRUCTURE-ACTIVITY RELATIONSHIP DISCOVERY

被引:2
作者
CHAPMAN, D
HARRIS, N
PARK, J
CRITCHLOW, RE
机构
[1] Arris Pharmaceutical Corporation, South San Francisco
来源
JOURNAL OF MOLECULAR GRAPHICS | 1995年 / 13卷 / 04期
关键词
COMPASS; DRUG DISCOVERY; GRAPHICAL USER INTERFACE; MAXIMAL COMMON SUBGRAPH; MOLECULAR DATABASE; MOLECULAR SIMILARITY; NAVIGATOR; STRUCTURE-ACTIVITY; RELATIONSHIPS;
D O I
10.1016/0263-7855(95)00034-4
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Navigator is a molecular database visualization sl stem, designed to support exploratory data analysis and informal structure-activity, relationship studies. In addition to the operations commonly found in chemical database systems, it provides new tools that facilitate substituent analysis and help elucidate the relationships among similar molecules and between related assays. Navigator's capabilities include two ways of displaying the relationships between analogs, mouse-sensitive charts of sets of molecules, mouse-sensitive plots of assay relationships, and access to a system for three-dimensional quantitative structure-activity relationship discovery. Navigator's mouse-based user interface provides a one-object/one-window paradigm that makes data manipulation easy even for inexperienced users. Navigator runs on Silicon Graphics workstations.
引用
收藏
页码:242 / 249
页数:8
相关论文
共 11 条
[1]   AN ALGORITHM FOR THE MULTIPLE COMMON SUBGRAPH PROBLEM [J].
BAYADA, DM ;
SIMPSON, RW ;
JOHNSON, AP ;
LAURENCO, C .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1992, 32 (06) :680-685
[2]   MCSS - A NEW ALGORITHM FOR PERCEPTION OF MAXIMAL COMMON SUBSTRUCTURES AND ITS APPLICATION TO NMR SPECTRAL STUDIES .1. THE ALGORITHM [J].
CHEN, LG ;
ROBIEN, W .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1992, 32 (05) :501-506
[3]   COMPARATIVE MOLECULAR-FIELD ANALYSIS (COMFA) .1. EFFECT OF SHAPE ON BINDING OF STEROIDS TO CARRIER PROTEINS [J].
CRAMER, RD ;
PATTERSON, DE ;
BUNCE, JD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (18) :5959-5967
[4]   SIMILARITY SEARCHING ON CAS REGISTRY SUBSTANCES .2. 2D STRUCTURAL SIMILARITY [J].
FISANICK, W ;
LIPKUS, AH ;
RUSINKO, A .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1994, 34 (01) :130-140
[5]   STRUCTURE-ACTIVITY-RELATIONSHIPS FROM MOLECULAR SIMILARITY-MATRICES [J].
GOOD, AC ;
SO, SS ;
RICHARDS, WG .
JOURNAL OF MEDICINAL CHEMISTRY, 1993, 36 (04) :433-438
[6]   MOLECULAR SUBSTRUCTURE SIMILARITY SEARCHING - EFFICIENT RETRIEVAL IN 2-DIMENSIONAL STRUCTURE DATABASES [J].
HAGADONE, TR .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1992, 32 (05) :515-521
[7]  
HAGADONE TR, 1992, J CHEM INF COMPUT SC, V32
[8]   COMPASS - PREDICTING BIOLOGICAL-ACTIVITIES FROM MOLECULAR-SURFACE PROPERTIES - PERFORMANCE COMPARISONS ON A STEROID BENCHMARK [J].
JAIN, AN ;
KOILE, K ;
CHAPMAN, D .
JOURNAL OF MEDICINAL CHEMISTRY, 1994, 37 (15) :2315-2327
[9]  
JAIN AN, 1993, 3D QSAR DRUG DESIGN
[10]  
Ousterhout JK, 2009, TCL TK TOOLKIT, V2