MODELS FOR NUCLEOSIDE GLYCOSYLASE ENZYMES - EVIDENCE THAT THE HYDROLYSIS OF BETA-D-RIBOFURANOSIDES REQUIRES A BACKSIDE PREASSOCIATION NUCLEOPHILE

被引:21
作者
CHERIAN, XM [1 ]
VANARMAN, SA [1 ]
CZARNIK, AW [1 ]
机构
[1] OHIO STATE UNIV,DEPT CHEM,COLUMBUS,OH 43210
关键词
D O I
10.1021/ja00167a056
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We have compared the pH-independent rates of glycosidic hydrolysis in a series of four fluorenone ketal derivatives of p-nitrophenyl β-D-ribofuranoside with each other and with that of p-nitrophenyl β-D-ribofuranoside itself. A syn-oriented carboxylate group clearly affords catalysis in the reaction and is more effective than identically oriented amide and ester groups by factors of at least 100-and 240-fold, respectively. The effect of the carboxylate can be viewed in three different ways: it provides a 3.2-fold acceleration as compared to underivatized p-nitrophenyl β-D-ribofuranoside, an approximately 30-fold acceleration when the decelerating effect of the ketal group is considered, and an 860-fold acceleration as compared to the compound that models an Asp-52 → Ala-52 mutant lysozyme. Most strikingly, the hydrolysis of a reference compound with impeded backside solvation of the oxocarbonium ion is very slow and provides a direct experimental verification for the importance of backside solvent participation in the hydrolysis reaction of a nucleoside analogue. These kinetic results do not provide any evidence concerning two potential explanations for the role of carboxylate in acetal hydrolysis: electrostatic destabilization of the ES complex by binding-induced desolvation of the carboxylate ion and lone pair exchange repulsion. The results are consistent with two other proposed carboxylate roles: electrostatic stabilization of an oxocarbonium ion like transition structure and anchimeric assistance by the carboxylate. While the most likely role for carboxylate in acetal hydrolysis is as a nucleophile, the low reactivity of the endo-amide and the unexceptional reactivity of the syn-oriented endo-carboxylate more directly support the electrostatic stabilization mechanism for the hydrolyses of these riboside derivatives. © 1990, American Chemical Society. All rights reserved.
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页码:4490 / 4498
页数:9
相关论文
共 84 条
[1]  
Albert, 1984, DETERMINATION IONIZA
[2]   BOND LENGTH AND REACTIVITY - VARIABLE LENGTH OF THE C-O SINGLE BOND [J].
ALLEN, FH ;
KIRBY, AJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1984, 106 (21) :6197-6200
[3]   CARBOXYL GROUP PARTICIPATION IN ACETAL HYDROLYSIS - HYDROLYSIS OF DISALICYL ACETALS [J].
ANDERSON, E ;
FIFE, TH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1973, 95 (19) :6437-6441
[4]   ON THE FUNCTION OF IONIZED CARBOXYLATE RESIDUES AT THE ACTIVE-SITES OF GLYCOSYL TRANSFERASE ENZYMES [J].
BAKTHAVACHALAM, V ;
CZARNIK, AW .
TETRAHEDRON LETTERS, 1987, 28 (26) :2925-2928
[5]   SYNTHESIS, STEREOCHEMISTRY, INTRAMOLECULAR CYCLIZATION, AND RATES OF HYDROLYSIS OF ADENOSINE 2',3'-ACETALS [J].
BAKTHAVACHALAM, V ;
LIN, LG ;
CHERIAN, XM ;
CZARNIK, AW .
CARBOHYDRATE RESEARCH, 1987, 170 (01) :124-135
[6]   COMPLETE KINETIC ISOTOPE EFFECT DESCRIPTION OF TRANSITION-STATES FOR ACID-CATALYZED HYDROLYZES OF METHYL ALPHA-GLUCOPYRANOSIDES AND BETA-GLUCOPYRANOSIDES [J].
BENNET, AJ ;
SINNOTT, ML .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (23) :7287-7294
[7]   ON CONFORMATION OF HEN EGG-WHITE LYSOZYME MOLECULE [J].
BLAKE, CCF ;
MAIR, GA ;
NORTH, ACT ;
PHILLIPS, DC ;
SARMA, VR .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1967, 167 (1009) :365-+
[8]   PROTON INVENTORY INVESTIGATION OF THE SPECIFIC ACID-CATALYZED HYDROLYSIS OF GAMMA-ETHOXY-GAMMA-BUTYROLACTONE [J].
BOKSER, AD ;
YORK, KA ;
HOGG, JL .
JOURNAL OF ORGANIC CHEMISTRY, 1986, 51 (01) :92-94
[9]   STEREOELECTRONIC EFFECTS AT OXYGEN - A VERY LARGE EFFECT ON THE HYDROLYSIS OF A CONFORMATIONALLY LOCKED ACETAL - IMPLICATIONS FOR BETA-GLYCOSIDASE MECHANISMS [J].
BRIGGS, AJ ;
EVANS, CM ;
GLENN, R ;
KIRBY, AJ .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1983, (11) :1637-1640
[10]  
BROWN DM, 1974, BASIC PRINCIPLES NUC, V2, pCH1