PROTOTYPIC SEQUENCES FOR HUMAN REPETITIVE DNA

被引：153
作者：
JURKA, J
WALICHIEWICZ, J
MILOSAVLJEVIC, A
机构：
[1] Linus Pauling Institute of Science and Medicine, Palo Alto, California, 94306
来源：
JOURNAL OF MOLECULAR EVOLUTION | 1992年 / 35卷 / 04期
关键词：
REPETITIVE DNA; DATABASE; HUMAN GENOME; PRIMATES;
D O I：
10.1007/BF00161166
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
We report a collection of 53 prototypic sequences representing known families of repetitive elements from the human genome. The prototypic sequences are either consensus sequences or selected examples of repetitive sequences. The collection includes: prototypes for high and medium reiteration frequency interspersed repeats, long terminal repeats of endogenous retroviruses, alphoid repeats, telomere-associated repeats, and some miscellaneous repeats. The collection is annotated and available electronically.
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页码：286 / 291
页数：6
相关论文
共 62 条
[1]   SEQUENCES FLANKING THE REPEAT ARRAYS OF HUMAN MINISATELLITES - ASSOCIATION WITH TANDEM AND DISPERSED REPEAT ELEMENTS [J].
ARMOUR, JAL ;
WONG, Z ;
WILSON, V ;
ROYLE, NJ ;
JEFFREYS, AJ .
NUCLEIC ACIDS RESEARCH, 1989, 17 (13) :4925-4935
[2]   CHARACTERIZATION OF THE ALU-RICH 5'-FLANKING REGION OF THE HUMAN PROTHROMBIN-ENCODING GENE - IDENTIFICATION OF A POSITIVE CIS-ACTING ELEMENT THAT REGULATES LIVER-SPECIFIC EXPRESSION [J].
BANCROFT, JD ;
SCHAEFER, LA ;
DEGEN, SJF .
GENE, 1990, 95 (02) :253-260
[3]  
BOSMA PJ, 1991, GENE, V100, P261
[4]   HUMAN SSAV-RELATED ENDOGENOUS RETROVIRAL ELEMENT - LTR-LIKE SEQUENCE AND CHROMOSOMAL LOCALIZATION TO 18Q21 [J].
BRACKWERNER, R ;
BARTON, DE ;
WERNER, T ;
FOELLMER, BE ;
LEIBMOSCH, C ;
FRANCKE, U ;
ERFLE, V ;
HEHLMANN, R .
GENOMICS, 1989, 4 (01) :68-75
[5]   SOURCES AND EVOLUTION OF HUMAN ALU REPEATED SEQUENCES [J].
BRITTEN, RJ ;
BARON, WF ;
STOUT, DB ;
DAVIDSON, EH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (13) :4770-4774
[6]   STRUCTURE AND POLYMORPHISM OF HUMAN TELOMERE-ASSOCIATED DNA [J].
BROWN, WRA ;
MACKINNON, PJ ;
VILLASANTE, A ;
SPURR, N ;
BUCKLE, VJ ;
DOBSON, MJ .
CELL, 1990, 63 (01) :119-132
[7]  
BROWNELL E, 1989, ONCOGENE, V4, P935
[8]   CLONING OF DECAY-ACCELERATING FACTOR SUGGESTS NOVEL USE OF SPLICING TO GENERATE 2 PROTEINS [J].
CARAS, IW ;
DAVITZ, MA ;
RHEE, L ;
WEDDELL, G ;
MARTIN, DW ;
NUSSENZWEIG, V .
NATURE, 1987, 325 (6104) :545-549
[9]  
CHEN SJ, 1989, ONCOGENE, V4, P195
[10]   THE LIPOPROTEIN LIPASE-ENCODING HUMAN GENE - SEQUENCE FROM INTRON-6 TO INTRON-9 AND PRESENCE IN INTRON-7 OF A 40-MILLION-YEAR-OLD ALU SEQUENCE [J].
CHUAT, JC ;
RAISONNIER, A ;
ETIENNE, J ;
GALIBERT, F .
GENE, 1992, 110 (02) :257-261
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