RESONANCE RAMAN-SPECTRA OF PLASTOCYANIN AND PSEUDOAZURIN - EVIDENCE FOR CONSERVED CYSTEINE LIGAND CONFORMATIONS IN CUPREDOXINS (BLUE COPPER PROTEINS)

被引:109
作者
HAN, J
ADMAN, ET
BEPPU, T
CODD, R
FREEMAN, HC
HUQ, L
LOEHR, TM
SANDERSLOEHR, J
机构
[1] OREGON GRAD INST SCI & TECHNOL,DEPT CHEM & BIOL SCI,BEAVERTON,OR 97006
[2] UNIV WASHINGTON,DEPT BIOL STRUCT,SEATTLE,WA 98195
[3] UNIV TOKYO,DEPT AGR CHEM,BUNKYO KU,TOKYO 113,JAPAN
[4] UNIV SYDNEY,DEPT CHEM,SYDNEY,NSW 2006,AUSTRALIA
关键词
D O I
10.1021/bi00109a014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
New resonance Raman (RR) spectra at 15 K are reported for poplar (Populus nigra) and oleander (Oleander nerium) plastocyanins and for Alcaligenes faecalis pseudoazurin. The spectra are compared with those of other blue copper proteins (cupredoxins). In all cases, nine or more vibrational modes between 330 and 460 cm-1 can be assigned to a coupling of the Cu-S(Cys) stretch with Cys ligand deformations. The fact that these vibrations occur at a relatively constant set of frequencies is testimony to the highly conserved ground-state structure of the Cu-Cys moiety. Shifts of the vibrational modes by 1-3 cm-1 upon deuterium exchange can be correlated with N-H...S hydrogen bonds from the protein backbone to the sulfur of the Cys ligand. There is marked variability in the intensities of these Cys-related vibrations, such that each class of cupredoxin has its own pattern of RR intensities. For example, plastocyanins from poplar, oleander, French bean, and spinach have their most intense feature at approximately 425 cm-1; azurins show greatest intensity at approximately 410 cm-1, stellacyanin and ascorbate oxidase at approximately 385 cm-1, and nitrite reductase at approximately 360 cm-1. These variable intensity patterns are related to differences in the electronic excited-state structures. We propose that they have a basis in the protein environment of the copper-cysteinate chromophore. A further insight into the vibrational spectra is provided by the structures of the six cupredoxins for which crystallographic refinements at high resolution are available (plastocyanins from P. nigra, O. nerium, and Enteromorpha prolifera, pseudoazurin from A.faecalis, azurin from Alcaligenes denitrificans, and cucumber basic blue protein). The average of the Cu-S(Cys) bond lengths is 2.12 +/- 0.05 angstrom. Since the observed range of bond lengths falls within the precision of the determinations, this variation is considered insignificant. The Cys ligand dihedral angles are also highly conserved. Cu-S(gamma)-C(beta)-C(alpha) is always near -170-degrees and S(gamma)-C(beta)-C(alpha)-N near 170-degrees. As a result, the Cu-S(gamma) bond is coplanar with the Cys side-chain atoms and part of the polypeptide backbone. The coplanarity accounts for the extensive coupling of Cu-S stretching and Cys deformation modes as seen in the RR spectrum. The conservation of this copper-cysteinate conformation in cupredoxins may indicate a favored pathway for electron transfer.
引用
收藏
页码:10904 / 10913
页数:10
相关论文
共 63 条
  • [11] RESONANCE RAMAN STUDIES OF BLUE COPPER PROTEINS - EFFECT OF TEMPERATURE AND ISOTOPIC SUBSTITUTIONS - STRUCTURAL AND THERMODYNAMIC IMPLICATIONS
    BLAIR, DF
    CAMPBELL, GW
    SCHOONOVER, JR
    CHAN, SI
    GRAY, HB
    MALMSTROM, BG
    PECHT, I
    SWANSON, BI
    WOODRUFF, WH
    CHO, WK
    ENGLISH, AM
    FRY, HA
    LUM, V
    NORTON, KA
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1985, 107 (20) : 5755 - 5766
  • [12] CAREY PR, 1982, BIOCH APPLICATIONS R, P47
  • [13] GEOMETRY OF INTERACTION OF METAL-IONS WITH SULFUR-CONTAINING LIGANDS IN PROTEIN STRUCTURES
    CHAKRABARTI, P
    [J]. BIOCHEMISTRY, 1989, 28 (14) : 6081 - 6085
  • [14] PRELIMINARY CRYSTALLOGRAPHIC DATA FOR A COPPER-CONTAINING PROTEIN, PLASTOCYANIN
    CHAPMAN, GV
    COLMAN, PM
    FREEMAN, HC
    GUSS, JM
    MURATA, M
    NORRIS, VA
    RAMSHAW, JAM
    VENKATAPPA, MP
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1977, 110 (01) : 187 - 189
  • [15] CHURCH WB, 1986, J BIOL CHEM, V261, P234
  • [16] CRYSTAL-STRUCTURE OF PLASTOCYANIN FROM A GREEN-ALGA, ENTEROMORPHA-PROLIFERA
    COLLYER, CA
    GUSS, JM
    SUGIMURA, Y
    YOSHIZAKI, F
    FREEMAN, HC
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 211 (03) : 617 - 632
  • [17] X-RAY CRYSTAL-STRUCTURE ANALYSIS OF PLASTOCYANIN AT 2.7A RESOLUTION
    COLMAN, PM
    FREEMAN, HC
    GUSS, JM
    MURATA, M
    NORRIS, VA
    RAMSHAW, JAM
    VENKATAPPA, MP
    [J]. NATURE, 1978, 272 (5651) : 319 - 324
  • [18] OPTICAL-ABSORPTION SPECTRA OF AZURIN AND STELLACYANIN IN GLYCEROL WATER AND ETHYLENE-GLYCOL WATER SOLUTIONS IN THE TEMPERATURE-RANGE 290-20-K
    CUPANE, A
    LEONE, M
    VITRANO, E
    CORDONE, L
    [J]. BIOPHYSICAL CHEMISTRY, 1990, 38 (03) : 213 - 224
  • [19] RESONANCE RAMAN-SPECTRA OF RUBREDOXIN - NEW ASSIGNMENTS AND VIBRATIONAL COUPLING MECHANISM FROM FE-54 FE-56 ISOTOPE SHIFTS AND VARIABLE-WAVELENGTH EXCITATION
    CZERNUSZEWICZ, RS
    LEGALL, J
    MOURA, I
    SPIRO, TG
    [J]. INORGANIC CHEMISTRY, 1986, 25 (05) : 696 - 700
  • [20] COMPLETE AMINO-ACID SEQUENCE OF POPLAR PLASTOCYANIN-B
    DIMITROV, MI
    EGOROV, CA
    DONCHEV, AA
    ATANASOV, BP
    [J]. FEBS LETTERS, 1987, 226 (01) : 17 - 22