DNA TRIPLE HELICES - A MOLECULAR-DYNAMICS STUDY

被引:7
|
作者
LAUGHTON, CA
NEIDLE, S
机构
关键词
D O I
10.1051/jcp/1991882597
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A molecular dynamics study of DNA triple helix structure and energetics is described. Simulations have been performed on the d(TC)5.d(GA)5.d(CT)5 triplex and the related triplexes with a mismatch at position 5 between the duplex and the Hoogesteen-binding third strand, i.e. d(TCTCXCTCTC). d(GAGAGYGAGA).d(CT)5, XY = CG, GC, AT.
引用
收藏
页码:2597 / 2603
页数:7
相关论文
共 50 条
  • [1] A DATABASE OF 32 DNA TRIPLETS TO STUDY TRIPLE HELICES BY MOLECULAR MECHANICS AND DYNAMICS
    PIRIOU, JM
    KETTERLE, C
    GABARROARPA, J
    COGNET, JAH
    LEBRET, M
    BIOPHYSICAL CHEMISTRY, 1994, 50 (03) : 323 - 343
  • [2] MOLECULAR-DYNAMICS SIMULATIONS OF ISOLATED HELICES OF MYOGLOBIN
    HIRST, JD
    BROOKS, CL
    BIOCHEMISTRY, 1995, 34 (23) : 7614 - 7621
  • [3] MOLECULAR-DYNAMICS SIMULATIONS OF POTASSIUM CHANNEL TRANSMEMBRANE HELICES
    KERR, ID
    SANSOM, MSP
    JOURNAL OF PHYSIOLOGY-LONDON, 1995, 487P : P194 - P195
  • [4] Sequence-independent recombination triple helices: A molecular dynamics study
    Kiran, MR
    Bansal, M
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1997, 15 (02): : 333 - 345
  • [5] MOLECULAR-DYNAMICS SIMULATIONS OF DNA DOUBLE HELICES - STUDIES OF SEQUENCE DEPENDENCE AND THE ROLE OF MISMATCH PAIRS IN THE DNA HELIX
    RAO, SN
    SINGH, UC
    KOLLMAN, PA
    ISRAEL JOURNAL OF CHEMISTRY, 1986, 27 (02) : 189 - 197
  • [6] MOLECULAR-DYNAMICS OF ALKYLATED DNA
    CRUZEIROHANSSON, L
    SWANN, PF
    PEARL, L
    GOODFELLOW, JM
    CARCINOGENESIS, 1992, 13 (11) : 2067 - 2073
  • [7] MOLECULAR-DYNAMICS STUDIES OF DNA
    BEVERIDGE, DL
    RAVISHANKER, G
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (02) : 246 - 255
  • [8] MOLECULAR-DYNAMICS STUDY OF THE BINDING OF ELSAMICIN-A TO DNA
    ALHAMBRA, C
    LUQUE, FJ
    PORTUGAL, J
    OROZCO, M
    EUROPEAN JOURNAL OF BIOCHEMISTRY, 1995, 230 (02): : 555 - 566
  • [9] MOLECULAR-DYNAMICS STUDY OF LEXITROPSIN-DNA BINDING
    WANG, S
    LEVY, GC
    BORER, PN
    BIOPHYSICAL JOURNAL, 1988, 53 (02) : A105 - A105
  • [10] KINKED STRUCTURES OF ISOLATED NICOTINIC RECEPTOR M2 HELICES - A MOLECULAR-DYNAMICS STUDY
    SANKARARAMAKRISHNAN, R
    SANSOM, MSP
    BIOPOLYMERS, 1994, 34 (12) : 1647 - 1657