The Aquaporin Channel Repertoire of the Tardigrade Milnesium tardigradum

被引:20
作者
Grohme, Markus A. [1 ]
Mali, Brahim [1 ]
Welnicz, Weronika [1 ]
Michel, Stephanie [1 ]
Schill, Ralph O. [2 ]
Frohme, Marcus [1 ]
机构
[1] Tech Univ Appl Sci Wildau, Mol Biotechnol & Funct Genom, Wildau, Germany
[2] Univ Stuttgart, Biol Inst, Zool, Stuttgart, Germany
关键词
unorthodox aquaporin; anhydrobiosis; tardigrade;
D O I
10.4137/BBI.S11497
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Limno-terrestrial tardigrades are small invertebrates that are subjected to periodic drought of their micro-environment. They have evolved to cope with these unfavorable conditions by anhydrobiosis, an ametabolic state of low cellular water. During drying and rehydration, tardigrades go through drastic changes in cellular water content. By our transcriptome sequencing effort of the limnoterrestrial tardigrade Milnesium tardigradum and by a combination of cloning and targeted sequence assembly, we identified transcripts encoding eleven putative aquaporins. Analysis of these sequences proposed 2 classical aquaporins, 8 aquaglyceroporins and a single potentially intracellular unorthodox aquaporin. Using quantitative real-time PCR we analyzed aquaporin transcript expression in the anhydrobiotic context. We have identified additional unorthodox aquaporins in various insect genomes and have identified a novel common conserved structural feature in these proteins. Analysis of the genomic organization of insect aquaporin genes revealed several conserved gene clusters.
引用
收藏
页码:153 / 165
页数:13
相关论文
共 72 条
[1]   Constraints of tolerance: why are desiccation-tolerant organisms so small or rare? [J].
Alpert, P .
JOURNAL OF EXPERIMENTAL BIOLOGY, 2006, 209 (09) :1575-1584
[2]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[3]   Point mutations in the aromatic/arginine region in aquaporin 1 allow passage of urea, glycerol, ammonia, and protons [J].
Beitz, E ;
Wu, BH ;
Holm, LM ;
Schultz, JE ;
Zeuthen, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (02) :269-274
[4]   The Protein Data Bank [J].
Berman, HM ;
Westbrook, J ;
Feng, Z ;
Gilliland, G ;
Bhat, TN ;
Weissig, H ;
Shindyalov, IN ;
Bourne, PE .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242
[5]   TOPCONS: consensus prediction of membrane protein topology [J].
Bernsel, Andreas ;
Viklund, Hakan ;
Hennerdal, Aron ;
Elofsson, Arne .
NUCLEIC ACIDS RESEARCH, 2009, 37 :W465-W468
[6]  
Bertolani Roberto, 2004, Journal of Limnology, V63, P16
[7]   Domain enhanced lookup time accelerated BLAST [J].
Boratyn, Grzegorz M. ;
Schaeffer, Alejandro A. ;
Agarwala, Richa ;
Altschul, Stephen F. ;
Lipman, David J. ;
Madden, Thomas L. .
BIOLOGY DIRECT, 2012, 7
[8]   Invertebrate aquaporins: a review [J].
Campbell, Ewan M. ;
Ball, Andrew ;
Hoppler, Stefan ;
Bowman, Alan S. .
JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMS AND ENVIRONMENTAL PHYSIOLOGY, 2008, 178 (08) :935-955
[9]   Cryptobiosis - a peculiar state of biological organization [J].
Clegg, JS .
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, 2001, 128 (04) :613-624
[10]   SilkDB v2.0: a platform for silkworm (Bombyx mori) genome biology [J].
Duan, Jun ;
Li, Ruiqiang ;
Cheng, Daojun ;
Fan, Wei ;
Zha, Xingfu ;
Cheng, Tingcai ;
Wu, Yuqian ;
Wang, Jun ;
Mita, Kazuei ;
Xiang, Zhonghuai ;
Xia, Qingyou .
NUCLEIC ACIDS RESEARCH, 2010, 38 :D453-D456