Metagenomic data of fungal internal transcribed spacer from serofluid dish, a traditional Chinese fermented food

被引:14
作者
Chen, Peng [1 ]
Zhao, Yang [2 ]
Wu, Zhengrong [1 ]
Liu, Ronghui [2 ]
Xu, Ruixiang [1 ]
Yan, Lei [3 ]
Li, Hongyu [1 ,2 ]
机构
[1] Lanzhou Univ, Sch Pharm, Donggang West Rd 199, Lanzhou 730020, Peoples R China
[2] Lanzhou Univ, Sch Life Sci, Inst Microbiol, Gansu Key Lab Biomonitoring & Bioremediat Environ, Tianshui Rd 222, Lanzhou 730000, Peoples R China
[3] Heilongjiang Bayi Agr Univ, Coll Life Sci & Technol, Daqing 163319, Peoples R China
关键词
Serofluid dish; Jiangshui; Fungal ITS; Cultivation-independent; Microbial diversity;
D O I
10.1016/j.gdata.2015.12.028
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Serofluid dish (or Jiangshui, in Chinese), a traditional food in the Chinese culture for thousands of years, is made from vegetables by fermentation. In this work, microorganism community of the fermented serofluid dish was investigated by the culture-independent method. The metagenomic data in this article contains the sequences of fungal internal transcribed spacer (ITS) regions of rRNA genes from 12 different serofluid dish samples. The metagenome comprised of 50,865 average raw reads with an average of 8,958,220 bp and G + C content is 45.62%. This is the first report on metagenomic data of fungal ITS from serofluid dish employing Illumina platform to profile the fungal communities of this little known fermented food from Gansu Province, China. The Metagenomic data of fungal internal transcribed spacer can be accessed at NCBI, SRA database accession no. SRP067411. (C) 2015 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
引用
收藏
页码:134 / 136
页数:3
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