STRUCTURE OF A PEPSIN RENIN INHIBITOR COMPLEX REVEALS A NOVEL CRYSTAL PACKING INDUCED BY MINOR CHEMICAL ALTERATIONS IN THE INHIBITOR

被引:36
作者
CHEN, LQ [1 ]
ERICKSON, JW [1 ]
RYDEL, TJ [1 ]
PARK, CH [1 ]
NEIDHART, D [1 ]
LULY, J [1 ]
ABADZAPATERO, C [1 ]
机构
[1] ABBOTT LABS, PROT CRYSTALLOG LAB, D-46Y, AP-9A, N CHICAGO, IL 60064 USA
关键词
D O I
10.1107/S0108768192001939
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The structure determination by molecular replacement methods of a monoclinic pepsin/renin inhibitor complex crystal, with two molecules in the asymmetric unit, is presented. The atomic model, consisting of two liganded pepsin molecules and 110 water molecules, has been refined to a final crystallographic R value of 0. 139 for data between 8 and 2.9 angstrom resolution. The structure reveals a previously undescribed pepsin dimer formed predominantly by polar interactions. Inhibitor binding induces global structural changes in the native enzyme similar, but not identical, to the ones observed in other chemically similar pepsin/renin inhibitor complexes crystallized in an orthorhombic form. A region of the polypeptide chain (residues 292-297) which was not visible in the orthorhombic crystal is well ordered in the presently described structure; possibly induced by crystal contacts. The crystal packing of native pepsin is compared with the two different crystal forms of the inhibited enzyme.
引用
收藏
页码:476 / 488
页数:13
相关论文
共 46 条
[31]   CRYSTALLIZATION OF PEPSIN FROM ALCOHOL [J].
NORTHROP, JH .
JOURNAL OF GENERAL PHYSIOLOGY, 1946, 30 (02) :177-184
[32]   STRUCTURAL AND EVOLUTIONARY RELATIONSHIPS BETWEEN RETROVIRAL AND EUKARYOTIC ASPARTIC PROTEINASES [J].
RAO, JKM ;
ERICKSON, JW ;
WLODAWER, A .
BIOCHEMISTRY, 1991, 30 (19) :4663-4671
[33]  
Rossmann MG, 1972, MOL REPLACEMENT METH
[34]   PROPERTIES OF A PURIFIED PROTEINASE FROM THE YEAST CANDIDA-ALBICANS [J].
RUCHEL, R .
BIOCHIMICA ET BIOPHYSICA ACTA, 1981, 659 (01) :99-113
[35]   HIGH-RESOLUTION X-RAY-DIFFRACTION STUDY OF THE COMPLEX BETWEEN ENDOTHIAPEPSIN AND AN OLIGOPEPTIDE INHIBITOR - THE ANALYSIS OF THE INHIBITOR BINDING AND DESCRIPTION OF THE RIGID BODY SHIFT IN THE ENZYME [J].
SALI, A ;
VEERAPANDIAN, B ;
COOPER, JB ;
FOUNDLING, SI ;
HOOVER, DJ ;
BLUNDELL, TL .
EMBO JOURNAL, 1989, 8 (08) :2179-2188
[36]   RENIN INHIBITORS - DESIGN AND SYNTHESIS OF A NEW CLASS OF CONFORMATIONALLY RESTRICTED ANALOGS OF ANGIOTENSINOGEN [J].
SHAM, HL ;
BOLIS, G ;
STEIN, HH ;
FESIK, SW ;
MARCOTTE, PA ;
PLATTNER, JJ ;
REMPEL, CA ;
GREER, J .
JOURNAL OF MEDICINAL CHEMISTRY, 1988, 31 (02) :284-295
[37]   MOLECULAR-REPLACEMENT STRUCTURE DETERMINATION OF 2 DIFFERENT ANTIBODY-ANTIGEN COMPLEXES [J].
SHERIFF, S ;
PADLAN, EA ;
COHEN, GH ;
DAVIES, DR .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE CRYSTAL ENGINEERING AND MATERIALS, 1990, 46 :418-425
[38]   MOLECULAR AND CRYSTAL-STRUCTURES OF MONOCLINIC PORCINE PEPSIN REFINED AT 1.8-A RESOLUTION [J].
SIELECKI, AR ;
FEDOROV, AA ;
BOODHOO, A ;
ANDREEVA, NS ;
JAMES, MNG .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 214 (01) :143-170
[39]   REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8-A RESOLUTION [J].
SIELECKI, AR ;
FUJINAGA, M ;
READ, RJ ;
JAMES, MNG .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 219 (04) :671-692
[40]  
STEIGEMANN W, 1974, THESIS TU MUNCHEN