Insights into multimodal imaging classification of ADHD

被引:111
作者
Colby, John B. [1 ]
Rudie, Jeffrey D. [1 ]
Brown, Jesse A. [2 ]
Douglas, Pamela K. [2 ]
Cohen, Mark S. [2 ]
Shehzad, Zarrar [3 ]
机构
[1] Univ Calif Los Angeles, Dept Neurol, Los Angeles, CA 90024 USA
[2] Univ Calif Los Angeles, Ctr Cognit Neurosci, Los Angeles, CA 90024 USA
[3] Yale Univ, Dept Psychol, New Haven, CT 06520 USA
关键词
attention deficit hyperactivity disorder; ADHD-200; machine learning; classification; feature selection; fMRI; graph theory;
D O I
10.3389/fnsys.2012.00059
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Attention deficit hyperactivity disorder (ADHD) currently is diagnosed in children by clinicians via subjective ADHD-specific behavioral instruments and by reports from the parents and teachers. Considering its high prevalence and large economic and societal costs, a quantitative tool that aids in diagnosis by characterizing underlying neurobiology would be extremely valuable. This provided motivation for the ADHD-200 machine learning (ML) competition, a multisite collaborative effort to investigate imaging classifiers for ADHD. Here we present our ML approach, which used structural and functional magnetic resonance imaging data, combined with demographic information, to predict diagnostic status of individuals with ADHD from typically developing (TD) children across eight different research sites. Structural features included quantitative metrics from 113 cortical and non-cortical regions. Functional features included Pearson correlation functional connectivity matrices, nodal and global graph theoretical measures, nodal power spectra, voxelwise global connectivity, and voxelwise regional homogeneity. We performed feature ranking for each site and modality using the multiple support vector machine recursive feature elimination (SVM-RFE) algorithm, and feature subset selection by optimizing the expected generalization performance of a radial basis function kernel SVM (RBFSVM) trained across a range of the top features. Site-specific RBF-SVMs using these optimal feature sets from each imaging modality were used to predict the class labels of an independent hold-out test set. A voting approach was used to combine these multiple predictions and assign final class labels. With this methodology we were able to predict diagnosis of ADHD with 55% accuracy (versus a 39% chance level in this sample), 33% sensitivity, and 80% specificity. This approach also allowed us to evaluate predictive structural and functional features giving insight into abnormal brain circuitry in ADHD.
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页数:18
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共 84 条
  • [1] Reduced right frontal cortical thickness in children, adolescents and adults with ADHD and its correlation to clinical variables: A cross-sectional study
    Almeida, Luis G.
    Ricardo-Garcell, Josefina
    Prado, Hugo
    Barajas, Lazaro
    Fernandez-Bouzas, Antonio
    Avila, David
    Martinez, Reyna B.
    [J]. JOURNAL OF PSYCHIATRIC RESEARCH, 2010, 44 (16) : 1214 - 1223
  • [2] Selection bias in gene extraction on the basis of microarray gene-expression data
    Ambroise, C
    McLachlan, GJ
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (10) : 6562 - 6566
  • [3] American Psychiatric Association, 2000, DIAGN STAT MAN MENT, DOI DOI 10.1016/B978-1-4377-2242-0.00016-X
  • [4] Archer Trevor, 2011, J Genet Syndr Gene Ther, V2
  • [5] Toward discovery science of human brain function
    Biswal, Bharat B.
    Mennes, Maarten
    Zuo, Xi-Nian
    Gohel, Suril
    Kelly, Clare
    Smith, Steve M.
    Beckmann, Christian F.
    Adelstein, Jonathan S.
    Buckner, Randy L.
    Colcombe, Stan
    Dogonowski, Anne-Marie
    Ernst, Monique
    Fair, Damien
    Hampson, Michelle
    Hoptman, Matthew J.
    Hyde, James S.
    Kiviniemi, Vesa J.
    Kotter, Rolf
    Li, Shi-Jiang
    Lin, Ching-Po
    Lowe, Mark J.
    Mackay, Clare
    Madden, David J.
    Madsen, Kristoffer H.
    Margulies, Daniel S.
    Mayberg, Helen S.
    McMahon, Katie
    Monk, Christopher S.
    Mostofsky, Stewart H.
    Nagel, Bonnie J.
    Pekar, James J.
    Peltier, Scott J.
    Petersen, Steven E.
    Riedl, Valentin
    Rombouts, Serge A. R. B.
    Rypma, Bart
    Schlaggar, Bradley L.
    Schmidt, Sein
    Seidler, Rachael D.
    Siegle, Greg J.
    Sorg, Christian
    Teng, Gao-Jun
    Veijola, Juha
    Villringer, Arno
    Walter, Martin
    Wang, Lihong
    Weng, Xu-Chu
    Whitfield-Gabrieli, Susan
    Williamson, Peter
    Windischberger, Christian
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (10) : 4734 - 4739
  • [6] Fast unfolding of communities in large networks
    Blondel, Vincent D.
    Guillaume, Jean-Loup
    Lambiotte, Renaud
    Lefebvre, Etienne
    [J]. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2008,
  • [7] Prevalence and assessment of attention-deficit/hyperactivity disorder in primary care settings
    Brown, RT
    Freeman, WS
    Perrin, JM
    Stein, MT
    Amler, RW
    Feldman, HM
    Pierce, K
    Wolraich, ML
    [J]. PEDIATRICS, 2001, 107 (03) : E43
  • [8] Default-mode brain dysfunction in mental disorders: A systematic review
    Broyd, Samantha J.
    Demanuele, Charmaine
    Debener, Stefan
    Helps, Suzannah K.
    James, Christopher J.
    Sonuga-Barke, Edmund J. S.
    [J]. NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS, 2009, 33 (03) : 279 - 296
  • [9] The brain's default network - Anatomy, function, and relevance to disease
    Buckner, Randy L.
    Andrews-Hanna, Jessica R.
    Schacter, Daniel L.
    [J]. YEAR IN COGNITIVE NEUROSCIENCE 2008, 2008, 1124 : 1 - 38
  • [10] Cortical Hubs Revealed by Intrinsic Functional Connectivity: Mapping, Assessment of Stability, and Relation to Alzheimer's Disease
    Buckner, Randy L.
    Sepulcre, Jorge
    Talukdar, Tanveer
    Krienen, Fenna M.
    Liu, Hesheng
    Hedden, Trey
    Andrews-Hanna, Jessica R.
    Sperling, Reisa A.
    Johnson, Keith A.
    [J]. JOURNAL OF NEUROSCIENCE, 2009, 29 (06) : 1860 - 1873