AM1 AND PM3 TRANSITION STRUCTURE FOR THE HYDRIDE TRANSFER - A MODEL OF REACTION CATALYZED BY DIHYDROFOLATE-REDUCTASE

被引:26
作者
ANDRES, J
SAFONT, VS
MARTINS, JBL
BELTRAN, A
MOLINER, V
机构
[1] Departament de Ciencies Experimentals, Universitat Jaume I, 12080 Castellon
来源
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM | 1995年 / 330卷
关键词
D O I
10.1016/0166-1280(94)03869-M
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The transition state structure for the hydride transfer in dihydrofolate reductase, DHFR, enzyme has been calculated with analytical gradients at semiempirical levels: AM 1 and PM3. The geometry, electronic structure and transition vector components are qualitatively semiempirical level independent. Comparing the transition structures for the hydride transfer step in models of liver alcohol dehydrogenase, formate dehydrogenase, lactate dehydrogenase, and glutathione reductase, the geometries of these stationary points are transferable and invariant. The topology of the transition structures in these enzymes resembles the one calculated in this paper.
引用
收藏
页码:411 / 416
页数:6
相关论文
共 38 条
[1]   EVALUATION OF THE FACTORS INFLUENCING REACTIVITY AND STEREOSPECIFICITY IN NAD(P)H DEPENDENT DEHYDROGENASE ENZYMES [J].
ALMARSSON, O ;
BRUICE, TC .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1993, 115 (06) :2125-2138
[2]   A PM3 QUANTUM-CHEMICAL STUDY OF THE PYRUVATE REDUCTION-MECHANISM CATALYZED BY LACTATE-DEHYDROGENASE [J].
ANDRES, J ;
MOLINER, V ;
KRECHL, J ;
SILLA, E .
BIOORGANIC CHEMISTRY, 1993, 21 (03) :260-274
[3]  
ANDRES J, IN PRESS
[4]  
[Anonymous], 1946, CHEM ENG NEWS, DOI DOI 10.1021/CEN-V024N010.P1375
[5]  
BENKOVIC S, 1993, SCIENCE, V26, P393
[6]  
BLAKLEY RL, 1985, FOLATES PTERINS
[7]   MOLECULAR-DYNAMICS FREE-ENERGY PERTURBATION STUDY ON THE RELATIVE AFFINITIES OF THE BINDING OF REDUCED AND OXIDIZED NADP TO DIHYDROFOLATE-REDUCTASE [J].
CUMMINS, PL ;
RAMNARAYAN, K ;
SINGH, UC ;
GREADY, JE .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (22) :8247-8256
[8]   THE DEVELOPMENT AND USE OF QUANTUM-MECHANICAL MOLECULAR-MODELS .76. AM1 - A NEW GENERAL-PURPOSE QUANTUM-MECHANICAL MOLECULAR-MODEL [J].
DEWAR, MJS ;
ZOEBISCH, EG ;
HEALY, EF ;
STEWART, JJP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1985, 107 (13) :3902-3909
[9]   CONSTRUCTION AND EVALUATION OF THE KINETIC SCHEME ASSOCIATED WITH DIHYDROFOLATE-REDUCTASE FROM ESCHERICHIA-COLI [J].
FIERKE, CA ;
JOHNSON, KA ;
BENKOVIC, SJ .
BIOCHEMISTRY, 1987, 26 (13) :4085-4092
[10]  
Frisch M.J., 1992, GAUSSIAN 92 REVISION