DATABASE ON THE STRUCTURE OF SMALL RIBOSOMAL-SUBUNIT RNA

被引:0
作者
VANDEPEER, Y [1 ]
VANDENBROECK, I [1 ]
DERIJK, P [1 ]
DEWACHTER, R [1 ]
机构
[1] UNIV ANTWERP,DEPT BIOCHEM,B-2610 ANTWERP,BELGIUM
关键词
D O I
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中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The database on small ribosomal subunit RNA structure contains (June 1994) 2824 nucleotide sequences. All these sequences are stored in the form of an alignment based on the adopted secondary structure model, which in turn is corroborated by the observation of compensating substitutions in the alignment. The complete database is made available to the scientific community through anonymous ftp on our server in Antwerp. A special effort was made to improve electronic retrieval and a program is supplied that allows to create different fire formats. The database can also be obtained from the EMBL nucleotide sequence library.
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页码:3488 / 3494
页数:7
相关论文
共 17 条
[1]  
Ainsworth GC, 1973, FUNGI ADV TREATISE
[2]   GENBANK [J].
BENSON, D ;
LIPMAN, DJ ;
OSTELL, J .
NUCLEIC ACIDS RESEARCH, 1993, 21 (13) :2963-2965
[3]  
Brusca RC, 1990, INVERTEBRATES
[4]  
CRONQUIST A, 1971, INTRO BOTANY
[5]  
DERIJK P, 1993, COMPUT APPL BIOSCI, V9, P735
[6]  
Margulis L, 1990, HDB PROTOCTISTA
[7]  
MOORE RT, 1988, TAXONOMY PUTTING PLA, P61
[8]   COMPILATION OF SMALL RIBOSOMAL-SUBUNIT RNA SEQUENCES [J].
NEEFS, JM ;
VANDEPEER, Y ;
DERIJK, P ;
GORIS, A ;
DEWACHTER, R .
NUCLEIC ACIDS RESEARCH, 1991, 19 :1987-2015
[9]   COMPILATION OF SMALL RIBOSOMAL-SUBUNIT RNA STRUCTURES [J].
NEEFS, JM ;
VANDEPEER, Y ;
DERIJK, P ;
CHAPELLE, S ;
DEWACHTER, R .
NUCLEIC ACIDS RESEARCH, 1993, 21 (13) :3025-3049
[10]   RIBOSOMAL-RNA - A KEY TO PHYLOGENY [J].
OLSEN, GJ ;
WOESE, CR .
FASEB JOURNAL, 1993, 7 (01) :113-123