Whole genome analysis of UV-induced mutagenesis in Caulobacter crescentus

被引:0
|
作者
Alves, Ingrid R. [1 ]
Vencio, Ricardo Z. [2 ]
Galhardo, Rodrigo S. [1 ]
机构
[1] Univ Sao Paulo, Inst Biomed Sci, Dept Microbiol, Sao Paulo, Brazil
[2] Univ Sao Paulo, Dept Comp & Math FFCLRP, Ribeirao Preto, SP, Brazil
来源
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS | 2022年 / 825卷
基金
巴西圣保罗研究基金会;
关键词
UV; Caulobacter; Mutagenesis; ImuC; DnaE2; Whole-genome analysis; Y-FAMILY; SPECIFICITY; DEFICIENT; MUTATIONS; BACTERIA; REPAIR; DNAE2; IMUB; RECA;
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
UV-induced mutagenesis is, to greater extent, a phenomenon dependent on translesion synthesis (TLS) and regulated by the SOS response in bacteria. Caulobacter crescentus, like many bacterial species, employs the ImuABC (ImuAB DnaE2) pathway in TLS. To have a better understanding of the characteristics of UV-induced mutagenesis in this organism, we performed a whole genome analysis of mutations present in survivors after an acute UVC exposure (300 J/m(2)). We found an average of 3.2 mutations/genome in irradiated samples, distributed in a mutational spectrum consisting exclusively of base substitutions, including tandem mutations. Although limited in conclusions by the small number of mutations identified, our study points to the feasibility of using whole-genome sequencing to study mutagenesis occurring in experiments involving a single acute exposure to genotoxic agents.
引用
收藏
页数:6
相关论文
共 50 条
  • [1] Whole genome analysis of UV-induced mutagenesis in Caulobacter crescentus
    Alves, Ingrid R.
    Vencio, Ricardo Z.
    Galhardo, Rodrigo S.
    MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2022, 825
  • [2] Whole-genome transcriptional analysis of heavy metal stresses in Caulobacter crescentus
    Hu, P
    Brodie, EL
    Suzuki, Y
    McAdams, HH
    Andersen, GL
    JOURNAL OF BACTERIOLOGY, 2005, 187 (24) : 8437 - 8449
  • [3] TRANSPOSON MUTAGENESIS IN CAULOBACTER-CRESCENTUS
    ELY, B
    CROFT, RH
    JOURNAL OF BACTERIOLOGY, 1982, 149 (02) : 620 - 625
  • [4] UV-INDUCED MUTAGENESIS IN YEAST
    ECKARDT, F
    HAYNES, RH
    MUTATION RESEARCH, 1978, 53 (02): : 182 - 183
  • [5] Complete genome sequence of Caulobacter crescentus
    Nierman, WC
    Feldblyum, TV
    Laub, MT
    Paulsen, IT
    Nelson, KE
    Eisen, J
    Heidelberg, JF
    Alley, MRK
    Ohta, N
    Maddock, JR
    Potocka, I
    Nelson, WC
    Newton, A
    Stephens, C
    Phadke, ND
    Ely, B
    DeBoy, RT
    Dodson, RJ
    Durkin, AS
    Gwinn, ML
    Haft, DH
    Kolonay, JF
    Smit, J
    Craven, MB
    Khouri, H
    Shetty, J
    Berry, K
    Utterback, T
    Tran, K
    Wolf, A
    Vamathevan, J
    Ermolaeva, M
    White, O
    Salzberg, SL
    Venter, JC
    Shapiro, L
    Fraser, CM
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (07) : 4136 - 4141
  • [6] KINETICS OF UV-INDUCED MUTAGENESIS IN YEAST
    ECKARDT, F
    HAYNES, RH
    BIOPHYSICAL JOURNAL, 1976, 16 (02) : A181 - A181
  • [7] FORMAL THEORY OF UV-INDUCED MUTAGENESIS
    ECKARDT, F
    HAYNES, RH
    CANADIAN JOURNAL OF GENETICS AND CYTOLOGY, 1976, 18 (03): : 558 - 558
  • [8] The Coding and Noncoding Architecture of the Caulobacter crescentus Genome
    Schrader, Jared M.
    Zhou, Bo
    Li, Gene-Wei
    Lasker, Keren
    Childers, W. Seth
    Williams, Brandon
    Long, Tao
    Crosson, Sean
    McAdams, Harley H.
    Weissman, Jonathan S.
    Shapiro, Lucy
    PLOS GENETICS, 2014, 10 (07):
  • [9] Genome analysis of DNA repair genes in the alpha proteobacterium Caulobacter crescentus
    Martins-Pinheiro, Marinalva
    Marques, Regina C. P.
    Menck, Carlos F. M.
    BMC MICROBIOLOGY, 2007, 7 (1)
  • [10] Microbial genomics -: Caulobacter crescentus genome sequence
    Pallen, M
    TRENDS IN MICROBIOLOGY, 2001, 9 (05) : 201 - 201