MOLECULAR-CLONING, SEQUENCE-ANALYSIS AND CODING ASSIGNMENT OF THE MAJOR INNER CAPSID PROTEIN GENE OF HUMAN GROUP-C ROTAVIRUS

被引:19
作者
COOKE, SJ [1 ]
LAMBDEN, PR [1 ]
CAUL, EO [1 ]
CLARKE, IN [1 ]
机构
[1] PUBL HLTH LAB,REG VIRUS LAB,BRISTOL BS2 8EL,ENGLAND
关键词
D O I
10.1016/0042-6822(91)90452-H
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The VP6 gene of human group C rotavirus was cloned and sequenced. Hybridization to the human group C and the porcine group C/Cowden dsRNA genomes assigned this coding sequence to segment 5. The complete human VP6 sequence contained an open reading frame of 1185 nucleotides (395 amino acids; deduced Mr 44,669 Da). The protein sequence demonstrated low homology with the group A VP6 sequences (41.7 to 42.7%) and high homology (88.9%) with the porcine group C VP6 sequence. However, the protein sequence alignments revealed a region of 10 amino acids that were significantly different between the human and the porcine group C viruses. © 1991.
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页码:781 / 785
页数:5
相关论文
共 32 条
[1]   PORCINE PARAROTAVIRUS - DETECTION, DIFFERENTIATION FROM ROTAVIRUS, AND PATHOGENESIS IN GNOTOBIOTIC PIGS [J].
BOHL, EH ;
SAIF, LJ ;
THEIL, KW ;
AGNES, AG ;
CROSS, RF .
JOURNAL OF CLINICAL MICROBIOLOGY, 1982, 15 (02) :312-319
[2]   COMPARATIVE SEQUENCE-ANALYSIS OF ROTAVIRUS GENOMIC SEGMENT 6 - THE GENE SPECIFYING VIRAL SUBGROUP-1 AND SUBGROUP-2 [J].
BOTH, GW ;
SIEGMAN, LJ ;
BELLAMY, AR ;
IKEGAMI, N ;
SHATKIN, AJ ;
FURUICHI, Y .
JOURNAL OF VIROLOGY, 1984, 51 (01) :97-101
[3]   SEQUENCE-ANALYSIS OF THE GENE (6) ENCODING THE MAJOR CAPSID PROTEIN (VP6) OF GROUP-C ROTAVIRUS - HIGHER THAN EXPECTED HOMOLOGY TO THE CORRESPONDING PROTEIN FROM GROUP-A VIRUS [J].
BREMONT, M ;
CHABANNEVAUTHEROT, D ;
VANNIER, P ;
MCCRAE, MA ;
COHEN, J .
VIROLOGY, 1990, 178 (02) :579-583
[4]   PREVALENCE OF ANTIBODY TO TYPICAL AND ATYPICAL ROTAVIRUSES IN PIGS [J].
BRIDGER, JC ;
BROWN, JF .
VETERINARY RECORD, 1985, 116 (02) :50-50
[5]  
BRIDGER JC, 1987, CIBA F SYMP, V128, P5
[6]   GROUP-C ROTAVIRUSES IN HUMANS [J].
BRIDGER, JC ;
PEDLEY, S ;
MCCRAE, MA .
JOURNAL OF CLINICAL MICROBIOLOGY, 1986, 23 (04) :760-763
[7]  
BROWN DWG, 1989, LANCET, V2, P737
[8]   GROUP-C ROTAVIRUS ASSOCIATED WITH FATAL ENTERITIS IN A FAMILY OUTBREAK [J].
CAUL, EO ;
ASHLEY, CR ;
DARVILLE, JM ;
BRIDGER, JC .
JOURNAL OF MEDICAL VIROLOGY, 1990, 30 (03) :201-205
[9]  
CHEN GM, 1985, LANCET, V2, P1123
[10]   CLONING OF BOVINE ROTAVIRUS (RF STRAIN) - NUCLEOTIDE-SEQUENCE OF THE GENE CODING FOR THE MAJOR CAPSID PROTEIN [J].
COHEN, J ;
LEFEVRE, F ;
ESTES, MK ;
BREMONT, M .
VIROLOGY, 1984, 138 (01) :178-182