Discovery of a novel (R)-selective bacterial hydroxynitrile lyase from Acidobacterium capsulatum

被引:21
作者
Wiedner, Romana [1 ]
Gruber-Khadjawi, Mandana [1 ]
Schwab, Helmut [1 ,2 ]
Steiner, Kerstin [1 ]
机构
[1] ACIB GmbH, Austrian Ctr Ind Biotechnol, A-8010 Graz, Austria
[2] Graz Univ Technol, Inst Mol Biotechnol, A-8010 Graz, Austria
来源
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL | 2014年 / 10卷 / 16期
关键词
Hydroxynitrile lyase; Manganese-dependent HNL; Biocatalysis; Cyanohydrin synthesis; Mandelonitrile;
D O I
10.1016/j.csbj.2014.07.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Hydroxynitrile lyases (HNLs) are powerful carbon-carbon bond forming enzymes. The reverse of their natural reaction - the stereoselective addition of hydrogen cyanide (HCN) to carbonyls - yields chiral cyanohydrins, versatile building blocks for the pharmaceutical and chemical industry. Recently, bacterial HNLs have been discovered, which represent a completely new type: HNLs with a cupin fold. Due to various benefits of cupins (e.g. high yield recombinant expression in Escherichia coli), the class of cupin HNLs provides a new source for interesting, powerful hydroxynitrile lyases in the ongoing search for HNLs with improved activity, enantioselectivity, stability and substrate scope. In this study, database mining revealed a novel cupin HNL from Acidobacterium capsulatum ATCC 51196 (AcHNL), which was able to catalyse the (R)-selective synthesis of mandelonitrile with significantly better conversion (97%) and enantioselectivity (96.7%) than other cupin HNLs. (C) 2014 Wiedner et al. Published by Elsevier B.V. on behalf of the Research Network of Computational and Structural Biotechnology.
引用
收藏
页码:58 / 62
页数:5
相关论文
共 21 条
  • [1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    Altschul, SF
    Madden, TL
    Schaffer, AA
    Zhang, JH
    Zhang, Z
    Miller, W
    Lipman, DJ
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
  • [2] How to overcome limitations in biotechnological processes - examples from hydroxynitrile lyase applications
    Andexer, J. N.
    Langermann, J. V.
    Kragl, U.
    Pohl, M.
    [J]. TRENDS IN BIOTECHNOLOGY, 2009, 27 (10) : 599 - 607
  • [3] The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
    Arnold, K
    Bordoli, L
    Kopp, J
    Schwede, T
    [J]. BIOINFORMATICS, 2006, 22 (02) : 195 - 201
  • [4] Improvement of a Stereoselective Biocatalytic Synthesis by Substrate and Enzyme Engineering: 2-Hydroxy-(4′-oxocyclohexyl)acetonitrile as the Model
    Avi, Manuela
    Wiedner, Romana M.
    Griengl, Herfried
    Schwab, Helmut
    [J]. CHEMISTRY-A EUROPEAN JOURNAL, 2008, 14 (36) : 11415 - 11422
  • [5] Chavez FA, 2011, ON BIOMIMETICS, P3
  • [6] Hydroxynitrile Lyases: Insights into Biochemistry, Discovery, and Engineering
    Dadashipour, Mohammad
    Asano, Yasuhisa
    [J]. ACS CATALYSIS, 2011, 1 (09): : 1121 - 1149
  • [7] Cupins: the most functionally diverse protein superfamily?
    Dunwell, JM
    Purvis, A
    Khuri, S
    [J]. PHYTOCHEMISTRY, 2004, 65 (01) : 7 - 17
  • [8] ESPript:: analysis of multiple sequence alignments in PostScript
    Gouet, P
    Courcelle, E
    Stuart, DI
    Métoz, F
    [J]. BIOINFORMATICS, 1999, 15 (04) : 305 - 308
  • [9] Biopolymers for biocatalysis: Structure and catalytic mechanism of hydroxynitrile lyases
    Gruber, K
    Kratky, C
    [J]. JOURNAL OF POLYMER SCIENCE PART A-POLYMER CHEMISTRY, 2004, 42 (03) : 479 - 486
  • [10] Gruber-Khadjawi M., 2012, ENZYME CATALYSIS ORG, V2, P947