MEASUREMENT OF RADIATION-INDUCED DNA DOUBLE-STRAND BREAKS BY PULSED-FIELD GEL-ELECTROPHORESIS

被引:112
作者
AGER, DD
DEWEY, WC
GARDINER, K
HARVEY, W
JOHNSON, RT
WALDREN, CA
机构
[1] UNIV CAMBRIDGE,DEPT ZOOL,CANC RES CAMPAIGN,MAMMALIAN CELL DNA REPAIR RES GRP,CAMBRIDGE CB2 3EJ,ENGLAND
[2] ELEANOR ROOSEVELT INST CANC RES,DENVER,CO 80206
关键词
D O I
10.2307/3577604
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We have examined the use of pulsed-field gel electrophoresis (PFGE) to measure DNA double-strand breaks induced in CHO cells by ionizing radiation. The PFGE assay provides a simple method for the measurement of DNA double-strand breaks for doses as low as 3-4 Gy ionizing radiation, and appears applicable for the measurement of damage produced by any agent producing double-strand breaks. The conditions of transverse alternating field electrophoresis determined both the sensitivity of the assay and the ability to resolve DNA fragments with different sizes. For example, with 0.8% agarose and a 1-min pulse time at 250 V for 18 h of electrophoresis, 0.39% of the DNA per gray migrated into the gel, and only molecules < 1500 kb could be resolved. With 0.56% agarose and a 60-min pulse time at 40 V for 6 days of electrophoresis, 0.55-0.90% of the DNA per gray migrated into the gel, and molecules between 1500 and 7000 kb could be resolved.
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页码:181 / 187
页数:7
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共 21 条
[11]   HIGH-RESOLUTION SEPARATION AND ACCURATE SIZE DETERMINATION IN PULSED-FIELD GEL-ELECTROPHORESIS OF DNA .2. EFFECT OF PULSE TIME AND ELECTRIC-FIELD STRENGTH AND IMPLICATIONS FOR MODELS OF THE SEPARATION PROCESS [J].
MATHEW, MK ;
SMITH, CL ;
CANTOR, CR .
BIOCHEMISTRY, 1988, 27 (26) :9210-9216
[12]   HIGH-RESOLUTION SEPARATION AND ACCURATE SIZE DETERMINATION IN PULSED-FIELD GEL-ELECTROPHORESIS OF DNA .1. DNA SIZE STANDARDS AND THE EFFECT OF AGAROSE AND TEMPERATURE [J].
MATHEW, MK ;
SMITH, CL ;
CANTOR, CR .
BIOCHEMISTRY, 1988, 27 (26) :9204-9210
[13]   CONSTRUCTION OF A MINICHROMOSOME BY DELETION AND ITS MITOTIC AND MEIOTIC BEHAVIOR IN FISSION YEAST [J].
NIWA, O ;
MATSUMOTO, T ;
YANAGIDA, M .
MOLECULAR AND GENERAL GENETICS, 1986, 203 (03) :397-405
[14]   AN ELECTROPHORETIC KARYOTYPE OF NEUROSPORA-CRASSA [J].
ORBACH, MJ ;
VOLLRATH, D ;
DAVIS, RW ;
YANOFSKY, C .
MOLECULAR AND CELLULAR BIOLOGY, 1988, 8 (04) :1469-1473
[15]   SEPARATION OF YEAST CHROMOSOME-SIZED DNAS BY PULSED FIELD GRADIENT GEL-ELECTROPHORESIS [J].
SCHWARTZ, DC ;
CANTOR, CR .
CELL, 1984, 37 (01) :67-75
[16]   AN ELECTROPHORETIC KARYOTYPE FOR SCHIZOSACCHAROMYCES-POMBE BY PULSED FIELD GEL-ELECTROPHORESIS [J].
SMITH, CL ;
MATSUMOTO, T ;
NIWA, O ;
KLCO, S ;
FAN, JB ;
YANAGIDA, M ;
CANTOR, CR .
NUCLEIC ACIDS RESEARCH, 1987, 15 (11) :4481-4489
[17]   OBSERVATION OF INDIVIDUAL DNA-MOLECULES UNDERGOING GEL-ELECTROPHORESIS [J].
SMITH, SB ;
ALDRIDGE, PK ;
CALLIS, JB .
SCIENCE, 1989, 243 (4888) :203-206
[18]   SEPARATION OF CHROMOSOMAL DNA-MOLECULES FROM CANDIDA-ALBICANS BY PULSED FIELD GEL-ELECTROPHORESIS [J].
SNELL, RG ;
WILKINS, RJ .
NUCLEIC ACIDS RESEARCH, 1986, 14 (11) :4401-4406
[19]   A MODEL FOR THE SEPARATION OF LARGE DNA-MOLECULES BY CROSSED-FIELD GEL-ELECTROPHORESIS [J].
SOUTHERN, EM ;
ANAND, R ;
BROWN, WRA ;
FLETCHER, DS .
NUCLEIC ACIDS RESEARCH, 1987, 15 (15) :5925-5943
[20]   RESOLUTION OF DNA-MOLECULES GREATER THAN 5 MEGABASES BY CONTOUR-CLAMPED HOMOGENEOUS ELECTRIC-FIELDS [J].
VOLLRATH, D ;
DAVIS, RW .
NUCLEIC ACIDS RESEARCH, 1987, 15 (19) :7865-7876