Background Malnutrition has been shown to be related to adverse clinical outcomes in patients with cardiovascular diseases. However, the association of nutritional state and long-term all-cause mortality in critical patients with atrial fibrillation(AF) remains unknown. Methods Critical patients who complicated with AF in the third edition of the Medical Information Mart in Critical Care(MIMIC-Ⅲ) registry were enrolled into this study. The primary endpoint was long-term all-cause mortality. Patients’ nutrition status was tested by 4 screening tools, which included controlling nutritional status(CONUT), prognostic nutritional index(PNI), geriatric nutritional risk index(GNRI) scores and body mass index(BMI). Kaplan-Meier and Cox proportional analyses were used to investigate the association between nutritional state and 4-year all-cause mortality. Results A total of 630 critical patients with AF(72.0 ± 11.2 years, male 36.5%) were included in this study, and the 4-year all-cause mortality rate was42.5%(n=268). It was up to 68.5% patients with malnutrition according to CONUT score. Kaplan-Meier and multivariate Cox proportional regression showed that the moderate to severe malnutrition was independent indicator for long-term mortality based on CONUT score(moderate vs. normal, adjusted hazard ratio [HR]: 1.78, 95% CI: 1.22-2.62; Severe vs. normal adjusted HR: 2.18, 95% CI: 1.52-3.15, respectively]. Furthermore, the CONUT score showed the best effect of predicting worsen long-term prognosis among 4 malnutrition screening tools(The Area under cure [AUC] of CONUT vs. PNI vs. GNRI vs. BMI = 0.656 vs. 0.643 vs. 0.617 vs. 0.552). Conclusions Malnutrition is a common complication and significantly affects the prognosis of critical patients with AF, and CONUT score is an optimal screening tool to assess the nutritional status and long-term prognosis in these patient. [S Chin J Cardiol 2023;24(3):121-132]