Tracking crop varieties using genotyping-by-sequencing markers: a case study using cassava (Manihot esculenta Crantz)

[11] Bove A(2014)Genetic mapping using genotyping-by-sequencing in the clonally propagated cassava Crop Sci 54 1-64

[12] Turchi A(2010)Regularization paths for generalized linear models via coordinate descent J Stat Software 33 1655-15

[13] Bashir G(2009)Fast model-based estimation of ancestry in unrelated individuals Genome Res 19 1-75

[14] Battaglia M(2010)Discriminant analysis of principal components: a new method for the analysis of genetically structured populations BMC Genet 11 559-90

[15] Camussi A(2007)PLINK: a tool set for whole-genome association and population-based linkage analyses Am J Hum Genet 81 289-31

[16] Duminil J(2004)APE: analyses of phylogenetics and evolution in R language Bioinformatics 20 525-70

[17] Di Michele M(2013)Criteria for the definition of similarity thresholds for identifying essentially derived varieties Plant Breed 132 246-83

[18] Yoon MS(2011)Enhancements to the ADMIXTURE algorithm for individual ancestry estimation BMC Bioinformatics 12 1358-5

[19] Song QJ(1984)Estimating F-statistics for the analysis of population structure Evolution 38 973-10

[20] Choi IY(2014)Fast and efficient estimation of individual ancestry coefficients Genetics 196 1403-5

[11] Bove A(2014)Genetic mapping using genotyping-by-sequencing in the clonally propagated cassava Crop Sci 54 1-64

[12] Turchi A(2010)Regularization paths for generalized linear models via coordinate descent J Stat Software 33 1655-15

[13] Bashir G(2009)Fast model-based estimation of ancestry in unrelated individuals Genome Res 19 1-75

[14] Battaglia M(2010)Discriminant analysis of principal components: a new method for the analysis of genetically structured populations BMC Genet 11 559-90

[15] Camussi A(2007)PLINK: a tool set for whole-genome association and population-based linkage analyses Am J Hum Genet 81 289-31

[16] Duminil J(2004)APE: analyses of phylogenetics and evolution in R language Bioinformatics 20 525-70

[17] Di Michele M(2013)Criteria for the definition of similarity thresholds for identifying essentially derived varieties Plant Breed 132 246-83

[18] Yoon MS(2011)Enhancements to the ADMIXTURE algorithm for individual ancestry estimation BMC Bioinformatics 12 1358-5

[19] Song QJ(1984)Estimating F-statistics for the analysis of population structure Evolution 38 973-10

[20] Choi IY(2014)Fast and efficient estimation of individual ancestry coefficients Genetics 196 1403-5