Development and characterization of 38 microsatellite markers for Camellia flavida based on transcriptome sequencing

被引：0

作者：

Yong-Qing Liufu

Guo-Qing Peng

Yong-Bin Lu

Quan-Qing Ye

Shao-Qing Tang

机构：

[1] Guangxi Normal University,Ministry of Education Key Laboratory for Ecology of Rare and Endangered Species and Environmental Protection, School of Life Sciences

来源：

Conservation Genetics Resources | 2014年 / 6卷

关键词：

Microsatellite markers; Transcriptome sequencing;

D O I：

暂无

中图分类号：

学科分类号：

摘要：

Camellia flavida is an endangered and valuable ornamental plant species with yellow flower. Here we isolated and characterized 38 polymorphic microsatellite loci for C. flavida using transcriptome sequencing. The markers were tested on one population of C. flavida and one population of closely related C. nitidissima. For C. fladviia, all of these loci showed polymorphism, and the number of alleles per locus ranged from 2 to 8. The observed and expected heterozygosities ranged from 0.250 to 0.900 and from 0.250 to 0.789, respectively. These markers will be useful in the research on the genetic diversity and population genetic structure of C. flavida. These loci can also be used for other related Camellia species.

引用

页码：1007 / 1010

页数：3

共 50 条

[1] Development and characterization of 38 microsatellite markers for Camellia flavida based on transcriptome sequencing
Liufu, Yong-Qing
Peng, Guo-Qing
Lu, Yong-Bin
Ye, Quan-Qing
Tang, Shao-Qing
CONSERVATION GENETICS RESOURCES, 2014, 6 (04) : 1007 - 1010
[2] Characterization and Development of Microsatellite Markers in Pseudotaxus chienii (Taxaceae) Based on Transcriptome Sequencing
Xu, Ruixiang
Wang, Zhen
Su, Yingjuan
Wang, Ting
FRONTIERS IN GENETICS, 2020, 11
[3] Development and characterization of microsatellite markers for Camellia nitidissima
Zong-You Chen
Yun-Sheng Jiang
Zheng-Feng Wang
Ji-Qing Wei
Xiao Wei
Hui Tang
Zhong-Chao Li
Conservation Genetics, 2010, 11 : 1163 - 1165
[4] Development and characterization of microsatellite markers for Camellia nitidissima
Chen, Zong-You
Jiang, Yun-Sheng
Wang, Zheng-Feng
Wei, Ji-Qing
Wei, Xiao
Tang, Hui
Li, Zhong-Chao
CONSERVATION GENETICS, 2010, 11 (03) : 1163 - 1165
[5] Characterization of new microsatellite markers based on the transcriptome sequencing of Clematis finetiana
Liu, Zhigao
Shao, Weili
Shen, Yamei
Ji, Mengcheng
Chen, Wenchao
Ye, Ying
Shen, Yongbao
HEREDITAS, 2018, 155 : 23
[6] Transcriptome Sequencing of Hevea brasiliensis for Development of Microsatellite Markers and Construction of a Genetic Linkage Map
Triwitayakorn, Kanokporn
Chatkulkawin, Pornsupa
Kanjanawattanawong, Supanath
Sraphet, Supajit
Yoocha, Thippawan
Sangsrakru, Duangjai
Chanprasert, Juntima
Ngamphiw, Chumpol
Jomchai, Nukoon
Therawattanasuk, Kanikar
Tangphatsornruang, Sithichoke
DNA RESEARCH, 2011, 18 (06) : 471 - 482
[7] De Novo Characterization of Leaf Transcriptome Using 454 Sequencing and Development of EST-SSR Markers in Tea (Camellia sinensis)
Wu, Hualing
Chen, Dong
Li, Jiaxian
Yu, Bo
Qiao, Xiaoyan
Huang, Hualin
He, Yumei
PLANT MOLECULAR BIOLOGY REPORTER, 2013, 31 (03) : 524 - 538
[8] DEVELOPMENT OF 15 GENIC-SSR MARKERS IN OIL-TEA TREE (Camellia oleifera) BASED ON TRANSCRIPTOME SEQUENCING
Jia, Baoguang
Lin, Qing
Zhang, Lin
Tan, Xiaofeng
Lei, Xiaolin
Hu, Xiaoyi
Shao, Fenggong
GENETIKA-BELGRADE, 2014, 46 (03): : 789 - 797
[9] De novoassembly and characterization of the transcriptome and development of microsatellite markers in a Chinese endemicEuphorbia kansui
Zhao, Xueyan
Wang, Meng
Chai, Jia
Li, Qian
Zhou, Yafu
Li, Yan
Cai, Xia
BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT, 2020, 34 (01) : 562 - 574
[10] Analysis on Microsatellite Loci of Daphnia similoides sinensis and Rapid Development of Primer Based on Transcriptome Sequencing
Wu, J. X.
Zhang, Y-N
Deng, D. D.
Xu, X. X.
Zhou, Z. Z.
RUSSIAN JOURNAL OF GENETICS, 2019, 55 (06) : 711 - 719

← 1 2 3 4 5 →