Mechanisms of ferritin assembly studied by time-resolved small-angle X-ray scattering

被引:14
|
作者
Sato D. [1 ]
Ikeguchi M. [1 ]
机构
[1] Department of Bioinformatics, Soka University, 1-236 Tangi-machi, Hachioji, Tokyo
关键词
Assembly; Electrostatic interaction; Ferritin; Net charge; Small-angle X-ray scattering (SAXS);
D O I
10.1007/s12551-019-00538-x
中图分类号
学科分类号
摘要
The assembly reaction of Escherichia coli ferritin A (EcFtnA) was studied using time-resolved small-angle X-ray scattering (SAXS). EcFtnA forms a cage-like structure that consists of 24 identical subunits and dissociates into dimers at acidic pH. The dimer maintains native-like secondary and tertiary structures and can reassemble into a 24-mer when the pH is increased. The time-dependent changes in the SAXS profiles of ferritin during its assembly were roughly explained by a simple model in which only tetramers, hexamers, and dodecamers were considered intermediates. The rate of assembly increased with increasing ionic strength and decreased with increasing pH (from pH 6 to pH 8). These tendencies might originate from repulsion between assembly units (dimers) with the same net charge sign. To test this hypothesis, ferritin mutants with different net charges (net-charge mutants) were prepared. In buffers with low ionic strength, the rate of assembly increased with decreasing net charge. Thus, repulsion between the assembly unit net charges was an important factor influencing the assembly rate. Although the differences in the assembly rate among net-charge mutants were not significant in buffers with an ionic strength higher than 0.1, the assembly rates increased with increasing ionic strength, suggesting that local electrostatic interactions are also responsible for the ionic-strength dependence of the assembly rate and are, on average, repulsive. © 2019, International Union for Pure and Applied Biophysics (IUPAB) and Springer-Verlag GmbH Germany, part of Springer Nature.
引用
收藏
页码:449 / 455
页数:6
相关论文
共 50 条
  • [41] Developments in small-angle X-ray scattering (SAXS) for characterizing the structure of surfactant-macromolecule interactions and their complex
    Chen, Ruixin
    Song, Yang
    Wang, Zhichun
    Ji, Hang
    Du, Zhongyao
    Ma, Qingwen
    Yang, Ying
    Liu, Xingxun
    Li, Na
    Sun, Yang
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2023, 251
  • [42] Small-angle X-ray scattering from a dual-component organogel to exhibit a charge transfer interaction
    Jeong, Y
    Friggeri, A
    Akiba, I
    Masunaga, H
    Sakurai, K
    Sakurai, S
    Okamoto, S
    Inoue, K
    Shinkai, S
    JOURNAL OF COLLOID AND INTERFACE SCIENCE, 2005, 283 (01) : 113 - 122
  • [43] THE EXPONENTIAL-DISTRIBUTION IN SMALL-ANGLE X-RAY-SCATTERING - THEORY AND PRACTICE
    JANOSI, A
    MONATSHEFTE FUR CHEMIE, 1993, 124 (8-9): : 815 - 826
  • [44] Integrative structural modeling with small angle X-ray scattering profiles
    Schneidman-Duhovny, Dina
    Kim, Seung Joong
    Sali, Andrej
    BMC STRUCTURAL BIOLOGY, 2012, 12
  • [45] Macromolecular docking restrained by a small angle X-ray scattering profile
    Schneidman-Duhovny, Dina
    Hammel, Michal
    Sali, Andrej
    JOURNAL OF STRUCTURAL BIOLOGY, 2011, 173 (03) : 461 - 471
  • [46] Optimization of sample thickness for small angle X-ray scattering (SAXS)
    Wu, Haijuan
    Chen, Rongchao
    Li, Zhihong
    INSTRUMENTATION SCIENCE & TECHNOLOGY, 2023, 51 (01) : 84 - 98
  • [47] Insights into open/closed conformations of the catalytically active human guanylate kinase as investigated by small-angle X-ray scattering
    Jain, Rohit
    Khan, Nazimuddin
    Menzel, Andreas
    Rajkovic, Ivan
    Konrad, Manfred
    Techert, Simone
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2016, 45 (01): : 81 - 89
  • [48] Small-angle X-ray scattering of single-wall carbon nanotubes dispersed in molten poly(ethylene terephthalate)
    Hernandez, J. J.
    Garcia-Gutierrez, M. C.
    Nogales, A.
    Rueda, D. R.
    Ezquerra, T. A.
    COMPOSITES SCIENCE AND TECHNOLOGY, 2006, 66 (15) : 2629 - 2632
  • [49] Pore Characterization of Sandy Silty Soil in Metro Surrounding Rock: A Synchrotron Small-Angle X-ray Scattering Experiment
    Zhang, Qi
    Li, Xiangchun
    Yang, Chunli
    Zeng, Jianhua
    Tian, Xin
    Shi, Yaoyu
    NATURAL RESOURCES RESEARCH, 2023, 32 (06) : 2981 - 2993
  • [50] Pore Characterization of Sandy Silty Soil in Metro Surrounding Rock: A Synchrotron Small-Angle X-ray Scattering Experiment
    Qi Zhang
    Xiangchun Li
    Chunli Yang
    Jianhua Zeng
    Xin Tian
    Yaoyu Shi
    Natural Resources Research, 2023, 32 : 2981 - 2993