Heuristics for multiobjective multiple sequence alignment

被引:0
作者
Maryam Abbasi
Luís Paquete
Francisco B. Pereira
机构
[1] University of Coimbra,CISUC, Department of Informatics Engineering
[2] Polytechnic Institute of Coimbra,undefined
来源
BioMedical Engineering OnLine | / 15卷
关键词
Multiple sequence alignment; Iterated local search; Multiobjective optimization;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 92 条
[1]  
Pei J(2008)Multiple protein sequence alignment Curr Opin Struct Biol 18 382-386
[2]  
Gelly JC(2011)iPBA: a tool for protein structure comparison using sequence alignment strategies Nucleic Acids Res 39 18-23
[3]  
Joseph AP(2011)The impact of multiple protein sequence alignment on phylogenetic estimation IEEE/ACM Trans Comput Biol Bioinform 8 1108-1119
[4]  
Srinivasan N(1970)A general method applicable to the search for similarities in the amino acid sequence of two proteins J Mol Biol 48 443-453
[5]  
De Brevern AG(2015)Is sequence alignment an art or a science? Syst Bot 40 14-26
[6]  
Wang LS(2013)Improvements on bicriteria pairwise sequence alignment: algorithms and applications Bioinformatics 29 996-1003
[7]  
Leebens Mack J(2013)Pareto optimal pairwise sequence alignment IEEE/ACM Trans Comput Biol Bioinform 10 481-493
[8]  
Wall PK(2014)Mosal: software tools for multiobjective sequence alignment Source Code Biol Med 9 2-577
[9]  
Beckmann K(1999)Pareto-optimal alignment of biological sequences Biophysics 44 565-2390
[10]  
de Pamphilis CW(2010)Multi-objective pairwise RNA sequence alignment Bioinformatics 26 2383-1613