Characterization of bZIP transcription factors from Dimocarpus longan Lour. and analysis of their tissue-specific expression patterns and response to heat stress

被引:0
|
作者
Wei Zheng
Tongtong Xie
Xuefei Yu
Ning Chen
Ziwei Zhang
机构
[1] Harbin University of Commerce,School of Pharmacy (Research Centre of Pharmaceutical Engineering Technology)
[2] Harbin University of Commerce,School of Library
来源
Journal of Genetics | 2020年 / 99卷
关键词
bZIP transcription factor; bioinformatics analysis; gene expression; heat treatment; Lour.;
D O I
暂无
中图分类号
学科分类号
摘要
Members of the bZIP transcription factor family play crucial roles in the regulation of plant development, biosynthesis of secondary metabolites, and response to abiotic and biotic stresses. To date, multiple bZIPs have been identified and investigated in numerous plant species. However, few studies have characterized bZIPs from Dimocarpus longan Lour. In this study, nine bZIPs from D. longan were identified from RNA-Seq data and further verified using the NCBI conserved domain search tool and Pfam database. Bioinformatics tools were used to systematically analyse the physicochemical properties, protein structures, multiple sequence alignment, motif compositions, evolutionary relationships, secondary structures, subcellular localization, phosphorylation sites, signal peptides, GO annotations and protein–protein interactions of the DlbZIPs. The expression patterns of the nine DlbZIPs were evaluated by qRT-PCR in roots and leaves and in response to varying durations of a 38°C heat treatment. DlbZIP3, DlbZIP5, DlbZIP6 and DlbZIP7 were differentially expressed between root and leaf tissues. All nine DlbZIPs responded to heat treatment in both roots and leaves, but their specific expression levels differed. DlbZIP4 and DlbZIP8 were highly expressed in roots after heat treatment, whereas DlbZIP1 and DlbZIP5 were highly expressed in leaves after heat treatment. These findings lay a foundation for increasing active secondary metabolite content and improving abiotic stress tolerance in D. longan using transgenic technology.
引用
收藏
相关论文
共 44 条
  • [31] Molecular characterization, tissue-specific expression, and RNA knockdown of the putative heat shock cognate 70 protein from Rhipicephalus haemaphysaloides
    Wang, Fangfang
    Gong, Haiyan
    Zhang, Houshuang
    Zhou, Yongzhi
    Cao, Jie
    Zhou, Jinlin
    PARASITOLOGY RESEARCH, 2019, 118 (05) : 1363 - 1370
  • [32] Genome Wide Identification and Characterization of Apple bHLH Transcription Factors and Expression Analysis in Response to Drought and Salt Stress
    Mao, Ke
    Dong, Qinglong
    Li, Chao
    Liu, Changhai
    Ma, Fengwang
    FRONTIERS IN PLANT SCIENCE, 2017, 8
  • [33] Genome-Wide Identification and Characterization of bHLH Transcription Factors in Zanthoxylum bungeanum and Their Expression Analysis in Response to Salt Stress
    Zhang, Xueli
    Nie, Jiangbo
    Liang, Shuoqing
    Wang, Shengshu
    Meng, Yuan
    Liu, Yonghong
    Liu, Yulin
    PLANT MOLECULAR BIOLOGY REPORTER, 2024,
  • [34] Identification of fxyd genes from the spotted scat (Scatophagus argus): Molecular cloning, tissue-specific expression, and response to acute hyposaline stress
    Hu, Pan
    Li, Siqi
    Zhong, Yong
    Mu, Xingjiang
    Gui, Lang
    Zhang, Junbin
    COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, 2014, 174 : 15 - 22
  • [35] Comprehensive RNA-Seq Profiling Reveals Temporal and Tissue-Specific Changes in Gene Expression in Sprague-Dawley Rats as Response to Heat Stress Challenges
    Dou, Jinhuan
    Canovas, Angela
    Brito, Luiz F.
    Yu, Ying
    Schenkel, Flavio S.
    Wang, Yachun
    FRONTIERS IN GENETICS, 2021, 12
  • [36] Tissue-specific, temporal, and core gene-dependent expression patterns of Hsp70s reveal functional allocation in Chlamys farreri under heat stress
    Zhang, Junhao
    Hu, Yuqing
    Wang, Jing
    Hou, Xiujiang
    Xiao, Yang
    Wang, Xinyuan
    Hu, Jingjie
    Bao, Zhenmin
    Xing, Qiang
    Huang, Xiaoting
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 283
  • [37] Molecular characterization of six heat shock protein 70 genes from Arma chinensis and their expression patterns in response to temperature stress
    Jian-Yu Meng
    Chang-Li Yang
    Han-Cheng Wang
    Yi Cao
    Chang-Yu Zhang
    Cell Stress and Chaperones, 2022, 27 : 659 - 671
  • [38] Molecular characterization of six heat shock protein 70 genes from Arma chinensis and their expression patterns in response to temperature stress
    Meng, Jian-Yu
    Yang, Chang-Li
    Wang, Han-Cheng
    Cao, Yi
    Zhang, Chang-Yu
    CELL STRESS & CHAPERONES, 2022, 27 (06): : 659 - 671
  • [39] Genome-wide characterization and expression analysis of WRKY transcription factors reveals biotic stress response potential mechanisms in Panax notoginseng
    Li, Jianbin
    Li, Leilin
    Hou, Jiae
    Ai, Mingtao
    Liu, Tiantai
    Yu, Saiying
    Cui, Xiuming
    Yang, Qian
    PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY, 2024, 134
  • [40] Identification of a potential tissue-specific biomarker cathepsin L-like gene from the planarian Dugesia japonica: Molecular cloning, characterization, and expression in response to heavy metal exposure
    Ma, Ke-Xue
    Song, Ge-ge
    Wu, Meng
    Zhang, He-Cai
    Chen, Guang-Wen
    Liu, De-Zeng
    ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2019, 180 : 73 - 79