Characterization of bZIP transcription factors from Dimocarpus longan Lour. and analysis of their tissue-specific expression patterns and response to heat stress

被引:0
|
作者
Wei Zheng
Tongtong Xie
Xuefei Yu
Ning Chen
Ziwei Zhang
机构
[1] Harbin University of Commerce,School of Pharmacy (Research Centre of Pharmaceutical Engineering Technology)
[2] Harbin University of Commerce,School of Library
来源
Journal of Genetics | 2020年 / 99卷
关键词
bZIP transcription factor; bioinformatics analysis; gene expression; heat treatment; Lour.;
D O I
暂无
中图分类号
学科分类号
摘要
Members of the bZIP transcription factor family play crucial roles in the regulation of plant development, biosynthesis of secondary metabolites, and response to abiotic and biotic stresses. To date, multiple bZIPs have been identified and investigated in numerous plant species. However, few studies have characterized bZIPs from Dimocarpus longan Lour. In this study, nine bZIPs from D. longan were identified from RNA-Seq data and further verified using the NCBI conserved domain search tool and Pfam database. Bioinformatics tools were used to systematically analyse the physicochemical properties, protein structures, multiple sequence alignment, motif compositions, evolutionary relationships, secondary structures, subcellular localization, phosphorylation sites, signal peptides, GO annotations and protein–protein interactions of the DlbZIPs. The expression patterns of the nine DlbZIPs were evaluated by qRT-PCR in roots and leaves and in response to varying durations of a 38°C heat treatment. DlbZIP3, DlbZIP5, DlbZIP6 and DlbZIP7 were differentially expressed between root and leaf tissues. All nine DlbZIPs responded to heat treatment in both roots and leaves, but their specific expression levels differed. DlbZIP4 and DlbZIP8 were highly expressed in roots after heat treatment, whereas DlbZIP1 and DlbZIP5 were highly expressed in leaves after heat treatment. These findings lay a foundation for increasing active secondary metabolite content and improving abiotic stress tolerance in D. longan using transgenic technology.
引用
收藏
相关论文
共 44 条
  • [21] Comprehensive Genome-Wide Analyses of Poplar R2R3-MYB Transcription Factors and Tissue-Specific Expression Patterns under Drought Stress
    Zhang, Xueli
    Wang, Haoran
    Chen, Ying
    Huang, Minren
    Zhu, Sheng
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (06)
  • [22] Histochemical Analysis of Tissue-Specific α-Tubulin Acetylation as a Response to Autophagy Induction by Different Stress Factors in Arabidopsis thaliana
    Lytvyn, D. I.
    Olenieva, V. D.
    Yemets, A. I.
    Blume, Ya. B.
    CYTOLOGY AND GENETICS, 2018, 52 (04) : 245 - 252
  • [23] Histochemical Analysis of Tissue-Specific α-Tubulin Acetylation as a Response to Autophagy Induction by Different Stress Factors in Arabidopsis thaliana
    D. I. Lytvyn
    V. D. Olenieva
    A. I. Yemets
    Ya. B. Blume
    Cytology and Genetics, 2018, 52 : 245 - 252
  • [24] Genome-wide evolutionary characterization and analysis of bZIP transcription factors and their expression profiles in response to multiple abiotic stresses in Brachypodium distachyon
    Xiang Liu
    Zhaoqing Chu
    BMC Genomics, 16
  • [25] Genome-wide evolutionary characterization and analysis of bZIP transcription factors and their expression profiles in response to multiple abiotic stresses in Brachypodium distachyon
    Liu, Xiang
    Chu, Zhaoqing
    BMC GENOMICS, 2015, 16
  • [26] Genome-wide analysis of bZIP transcription factors and their expression patterns in response to methyl jasmonate and low-temperature stresses in Platycodon grandiflorus
    Fan, Jizhou
    Chen, Na
    Rao, Weiyi
    Ding, Wanyue
    Wang, Yuqing
    Duan, Yingying
    Wu, Jing
    Xing, Shihai
    PEERJ, 2024, 12
  • [27] Characterization of miRNAs from sardine (Sardina pilchardusWalbaum, 1792) and their tissue-specific expression analysis in brain and liver
    de la Fuente Jimenez, Juan Luis
    Sharma, Ashutosh
    Paul, Sujay
    3 BIOTECH, 2020, 10 (07)
  • [28] Structural analysis and tissue-specific expression patterns of a novel salt-inducible NAC transcription factor gene from Nicotiana tabacum cv. Xanthi
    Han, Q. Q.
    Qiao, P.
    Song, Y. Z.
    Zhang, J. Y.
    JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY, 2014, 89 (06): : 700 - 706
  • [29] Characterization of miRNAs from sardine (Sardina pilchardus Walbaum, 1792) and their tissue-specific expression analysis in brain and liver
    Juan Luis de la Fuente Jiménez
    Ashutosh Sharma
    Sujay Paul
    3 Biotech, 2020, 10
  • [30] Molecular characterization, tissue-specific expression, and RNA knockdown of the putative heat shock cognate 70 protein from Rhipicephalus haemaphysaloides
    Fangfang Wang
    Haiyan Gong
    Houshuang Zhang
    Yongzhi Zhou
    Jie Cao
    Jinlin Zhou
    Parasitology Research, 2019, 118 : 1363 - 1370