ALASKA: A Mathematica package for two-state kinetic analysis of protein folding reactions
被引:0
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作者:
Rendall E. Burton
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机构:Duke University Medical Center,Department of Biochemistry
Rendall E. Burton
Richard S. Busby
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机构:Duke University Medical Center,Department of Biochemistry
Richard S. Busby
Terrence G. Oas
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机构:Duke University Medical Center,Department of Biochemistry
Terrence G. Oas
机构:
[1] Duke University Medical Center,Department of Biochemistry
来源:
Journal of Biomolecular NMR
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1998年
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11卷
关键词:
dynamic NMR;
kinetics;
line shape simulation;
protein folding;
D O I:
暂无
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学科分类号:
摘要:
A Mathematica package (ALASKA) has been developed to simplify the measurement of protein folding kinetics by analysis of 1H NMR lineshape analysis. This package reads NMR data in ASCII format and can simulate an aromatic 1 NMR spectrum with or without lineshape broadening from chemical exchange. We describe the analysis of a urea denaturation series of a fast-folding protein, the G46A/G48A variant of monomeric λ repressor.
机构:
Nanjing Univ, Natl Lab Solid State Microstruct, Nanjing 210093, Peoples R ChinaNanjing Univ, Natl Lab Solid State Microstruct, Nanjing 210093, Peoples R China
Fan, K
Wang, J
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机构:Nanjing Univ, Natl Lab Solid State Microstruct, Nanjing 210093, Peoples R China
Wang, J
Wang, W
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机构:Nanjing Univ, Natl Lab Solid State Microstruct, Nanjing 210093, Peoples R China
机构:
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94143 USA
Rollins, Geoffrey C.
Dill, Ken A.
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机构:
SUNY Stony Brook, Laufer Ctr Phys & Quantitat Biol, Stony Brook, NY 11790 USA
SUNY Stony Brook, Dept Chem, Stony Brook, NY 11790 USA
SUNY Stony Brook, Dept Phys & Astron, Stony Brook, NY 11790 USAUniv Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94143 USA