Substrate-recognition mechanism of tomato β-galactosidase 4 using X-ray crystallography and docking simulation

被引:0
|
作者
Kaori Matsuyama
Tatsuya Kondo
Kiyohiko Igarashi
Tatsuji Sakamoto
Megumi Ishimaru
机构
[1] The University of Tokyo,Department of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences
[2] Osaka Prefecture University,Division of Applied Life Sciences, Graduate School of Life and Environmental Sciences
[3] Kindai University,Faculty of Biology
来源
Planta | 2020年 / 252卷
关键词
β-galactosidase; Substrate-recognition; X-ray crystallography; Simulation;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Substrate-recognition mechanism of tomato β-galactosidase 4 using X-ray crystallography and docking simulation
    Matsuyama, Kaori
    Kondo, Tatsuya
    Igarashi, Kiyohiko
    Sakamoto, Tatsuji
    Ishimaru, Megumi
    PLANTA, 2020, 252 (04)
  • [2] Fragment Screening Using X-Ray Crystallography
    Davies, Thomas G.
    Tickle, Ian J.
    FRAGMENT-BASED DRUG DISCOVERY AND X-RAY CRYSTALLOGRAPHY, 2012, 317 : 33 - 59
  • [3] Uracil recognition in archaeal DNA polymerases captured by X-ray crystallography
    Firbank, Susan J.
    Wardle, Josephine
    Heslop, Pauline
    Lewis, Richard J.
    Connolly, Bernard A.
    JOURNAL OF MOLECULAR BIOLOGY, 2008, 381 (03) : 529 - 539
  • [4] X-ray Crystallography and Computational Docking for the Detection and Development of Protein-Ligand Interactions
    Kershaw, N. M.
    Wright, G. S. A.
    Sharma, R.
    Antonyuk, S. V.
    Strange, R. W.
    Berry, N. G.
    O'Neill, P. M.
    Hasnain, S. S.
    CURRENT MEDICINAL CHEMISTRY, 2013, 20 (04) : 569 - 575
  • [5] X-ray Crystallography as a Tool for Mechanism-of-Action Studies and Drug Discovery
    Ennifar, Eric
    CURRENT PHARMACEUTICAL BIOTECHNOLOGY, 2013, 14 (05) : 537 - 550
  • [6] Ligand migration in myoglobin: A combined study of computer simulation and x-ray crystallography
    Tsuduki, Takayuki
    Tomita, Ayana
    Koshihara, Shin-ya
    Adachi, Shin-ichi
    Yamato, Takahisa
    JOURNAL OF CHEMICAL PHYSICS, 2012, 136 (16)
  • [7] Analysis of a coagulation sludge contamination with metals using X-ray crystallography
    Wiewiorska, Iwona
    Rybicki, Stanislaw M.
    DESALINATION AND WATER TREATMENT, 2022, 254 : 151 - 159
  • [8] Backdoor opening mechanism in acetylcholinesterase based on X-ray crystallography and molecular dynamics simulations
    Sanson, Benoit
    Colletier, Jacques-Philippe
    Xu, Yechun
    Lang, P. Therese
    Jiang, Hualiang
    Silman, Israel
    Sussman, Joel L.
    Weik, Martin
    PROTEIN SCIENCE, 2011, 20 (07) : 1114 - 1118
  • [9] Molecular insights into the mechanism of 4-hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X-ray crystallography and computational simulations
    Lin, Hong-Yan
    Yang, Jing-Fang
    Wang, Da-Wei
    Hao, Ge-Fei
    Dong, Jiang-Qing
    Wang, Yu-Xia
    Yang, Wen-Chao
    Wu, Jia-Wei
    Zhan, Chang-Guo
    Yang, Guang-Fu
    FEBS JOURNAL, 2019, 286 (05) : 975 - 990
  • [10] Discovery of new potential triplet acting inhibitor for Alzheimer's disease via X-ray crystallography, molecular docking and molecular dynamics
    Sivakumar, Maharajan
    Saravanan, Kandasamy
    Saravanan, Velautham
    Sugarthi, Srinivasan
    Kumar, Shankar Madan
    Isa, Mustafa Alhaji
    Rajakumar, Perumal
    Aravindhan, Sanmargam
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2020, 38 (07) : 1903 - 1917