Whole genome analysis of CRISPR Cas9 sgRNA off-target homologies via an efficient computational algorithm

被引:0
作者
Hong Zhou
Michael Zhou
Daisy Li
Joseph Manthey
Ekaterina Lioutikova
Hong Wang
Xiao Zeng
机构
[1] University of Saint Joseph,Department of Mathematical Science
[2] Hall High School,Susan L. Cullman Laboratory for Cancer Research, Department of Chemical Biology and Centre for Cancer Prevention Research, Ernest Mario School of Pharmacy, Rutgers
[3] The State University of New Jersey,undefined
[4] PBSG,undefined
[5] LLC,undefined
来源
BMC Genomics | / 18卷
关键词
sgRNA; Off-target homology; Crispr; Cas9; Computational algorithm; Genome wide;
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  • [1] Jinek M(2012)A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity Science 337 816-821
  • [2] Chylinski K(2013)RNA-guided human genome engineering via Cas9 Science 339 823-826
  • [3] Fonfara I(2014)Development and applications of CRISPR-Cas9 for genome engineering Cell 157 1262-1278
  • [4] Hauer M(2016)Biology and applications of CRISPR systems: harnessing nature’s toolbox for genome engineering Cell 164 29-44
  • [5] Doudna JA(2015)Making the cut CRISPR genome-editing technology shows its power Science 350 1456-1457
  • [6] Charpentier E(2014)Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation Nat Biotechnol 32 1262-1267
  • [7] Mali P(2016)Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9 Nat Biotechnol 34 184-191
  • [8] Yang L(2013)CRISPR/Cas9 systems targeting β-globin and CCR5 genes have substantial off-target activity Nucleic Acids Res 41 9584-9592
  • [9] Esvelt KM(2013)High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells Nat Biotechnol 31 822-826
  • [10] Aach J(2013)DNA targeting specificity of RNA-guided Cas9 nucleases Nat Biotechnol 31 827-832