The transcriptome of a “sleeping” invader: de novo assembly and annotation of the transcriptome of aestivating Cornu aspersum

被引:0
|
作者
Aristeidis Parmakelis
Panayiota Kotsakiozi
Christos K. Kontos
Panagiotis G. Adamopoulos
Andreas Scorilas
机构
[1] National and Kapodistrian University of Athens,Department of Ecology and Taxonomy, Faculty of Biology
[2] National and Kapodistrian University of Athens,Department of Biochemistry and Molecular Biology, Faculty of Biology
来源
BMC Genomics | / 18卷
关键词
Land-snail; Next-generation sequencing (NGS); Non-model organism; RNA-seq;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] De Novo Transcriptome Assembly and Functional Annotation in Five Species of Bats
    Diana D. Moreno-Santillán
    Carlos Machain-Williams
    Georgina Hernández-Montes
    Jorge Ortega
    Scientific Reports, 9
  • [22] transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation
    Timothy R. Fallon
    Tereza Čalounová
    Martin Mokrejš
    Jing-Ke Weng
    Tomáš Pluskal
    BMC Bioinformatics, 24
  • [23] De novo transcriptome assembly and gene annotation for the toxic dinoflagellate Dinophysis
    Gaonkar, Chetan C.
    Campbell, Lisa
    SCIENTIFIC DATA, 2023, 10 (01)
  • [24] De novo assembly and annotation of the Antarctic copepod (Tigriopus kingsejongensis) transcriptome
    Kim, Hui-Su
    Lee, Bo-Young
    Han, Jeonghoon
    Lee, Young Hwan
    Min, Gi-Sik
    Kim, Sanghee
    Lee, Jae-Seong
    MARINE GENOMICS, 2016, 28 : 37 - 39
  • [25] Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina
    Foong, Lian Chee
    Ho, Anthony Siong Hock
    Yeo, Brandon Pei Hui
    Lim, Yang Mooi
    Tam, Sheh May
    DATA IN BRIEF, 2019, 23
  • [26] De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango
    Chabikwa, Tinashe G.
    Barbier, Francois F.
    Tanurdzic, Milos
    Beveridge, Christine A.
    SCIENTIFIC DATA, 2020, 7 (01)
  • [27] De Novo Assembly and Annotation of Salvia splendens Transcriptome Using the Illumina Platform
    Ge, Xiuxiu
    Chen, Hongwei
    Wang, Hongli
    Shi, Aiping
    Liu, Kefeng
    PLOS ONE, 2014, 9 (03):
  • [28] Improved annotation with de novo transcriptome assembly in four social amoeba species
    Reema Singh
    Hajara M. Lawal
    Christina Schilde
    Gernot Glöckner
    Geoffrey J. Barton
    Pauline Schaap
    Christian Cole
    BMC Genomics, 18
  • [29] Sequencing, de novo assembly and annotation of a pink bollworm larval midgut transcriptome
    Tassone, Erica E.
    Zastrow-Hayes, Gina
    Mathis, John
    Nelson, Mark E.
    Wu, Gusui
    Flexner, J. Lindsey
    Carriere, Yves
    Tabashnik, Bruce E.
    Fabrick, Jeffrey A.
    GIGASCIENCE, 2016, 5
  • [30] Improved annotation with de novo transcriptome assembly in four social amoeba species
    Singh, Reema
    Lawal, Hajara M.
    Schilde, Christina
    Gloeckner, Gernot
    Barton, Geoffrey J.
    Schaap, Pauline
    Cole, Christian
    BMC GENOMICS, 2017, 18