Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

被引：0

作者：

Alexa B. R. McIntyre

Rachid Ounit

Ebrahim Afshinnekoo

Robert J. Prill

Elizabeth Hénaff

Noah Alexander

Samuel S. Minot

David Danko

Jonathan Foox

Sofia Ahsanuddin

Scott Tighe

Nur A. Hasan

Poorani Subramanian

Kelly Moffat

Shawn Levy

Stefano Lonardi

Nick Greenfield

Rita R. Colwell

Gail L. Rosen

Christopher E. Mason

机构：

[1] Tri-Institutional Program in Computational Biology and Medicine,Department of Physiology and Biophysics

[2] Weill Cornell Medicine,Department of Computer Science and Engineering

[3] The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine,School of Medicine

[4] University of California,Department of Electrical and Computer Engineering

[5] New York Medical College,undefined

[6] Accelerated Discovery Lab,undefined

[7] IBM Almaden Research Center,undefined

[8] One Codex,undefined

[9] Reference Genomics,undefined

[10] University of Vermont,undefined

[11] CosmosID,undefined

[12] Inc,undefined

[13] Center for Bioinformatics and Computational Biology,undefined

[14] University of Maryland Institute for Advanced Computer Studies (UMIACS),undefined

[15] HudsonAlpha Institute for Biotechnology,undefined

[16] Johns Hopkins University Bloomberg School of Public Health,undefined

[17] Drexel University,undefined

[18] The Feil Family Brain and Mind Research Institute,undefined

来源：

Genome Biology | / 18卷

关键词：

Metagenomics; Shotgun sequencing; Taxonomy; Classification; Comparison; Ensemble methods; Meta-classification; Pathogen detection;

D O I：

暂无

中图分类号：

学科分类号：

摘要：

引用

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