De novo assembly and characterization of transcriptome using Illumina paired-end sequencing and identification of CesA gene in ramie (Boehmeria nivea L. Gaud)

被引:0
|
作者
Touming Liu
Siyuan Zhu
Qingming Tang
Ping Chen
Yongting Yu
Shouwei Tang
机构
[1] Institute of Bast Fiber Crops and Center of Southern Economic Crops,
[2] Chinese Academy of Agricultural Sciences,undefined
来源
BMC Genomics | / 14卷
关键词
Gene Ontology; Stem Bark; Ramie Fiber; Bast Fiber; Cellulose Biosynthesis;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] De novo transcriptome assembly and analysis of Sf21 cells using illumina paired end sequencing
    Kakumani, Pavan Kumar
    Shukla, Rohit
    Todur, Vivek N.
    Malhotra, Pawan
    Mukherjee, Sunil K.
    Bhatnagar, Raj K.
    BIOLOGY DIRECT, 2015, 10
  • [33] The role of melanin pathways in extremotolerance and virulence of Fonsecaea revealed by de novo assembly transcriptomics using illumina paired-end sequencing
    Li, X. Q.
    Guo, B. L.
    Cai, W. Y.
    Zhang, J. M.
    Huang, H. Q.
    Zhan, P.
    Xi, L. Y.
    Vicente, V. A.
    Stielow, B.
    Sun, J. F.
    de Hoog, G. S.
    STUDIES IN MYCOLOGY, 2016, (83) : 1 - 18
  • [34] Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers
    Wenliang Wei
    Xiaoqiong Qi
    Linhai Wang
    Yanxin Zhang
    Wei Hua
    Donghua Li
    Haixia Lv
    Xiurong Zhang
    BMC Genomics, 12
  • [35] Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers
    Wei, Wenliang
    Qi, Xiaoqiong
    Wang, Linhai
    Zhang, Yanxin
    Hua, Wei
    Li, Donghua
    Lv, Haixia
    Zhang, Xiurong
    BMC GENOMICS, 2011, 12
  • [36] Identification of 32 full-length NAC transcription factors in ramie (Boehmeria nivea L. Gaud) and characterization of the expression pattern of these genes
    Touming Liu
    Siyuan Zhu
    Qingming Tang
    Shouwei Tang
    Molecular Genetics and Genomics, 2014, 289 : 675 - 684
  • [37] Identification of 32 full-length NAC transcription factors in ramie (Boehmeria nivea L. Gaud) and characterization of the expression pattern of these genes
    Liu, Touming
    Zhu, Siyuan
    Tang, Qingming
    Tang, Shouwei
    MOLECULAR GENETICS AND GENOMICS, 2014, 289 (04) : 675 - 684
  • [38] De novo assembly, gene annotation, and simple sequence repeat marker development using Illumina paired-end transcriptome sequences in the pearl oyster Pinctada maxima
    Deng, Yuewen
    Lei, Qiannan
    Tian, Qunli
    Xie, Shaohe
    Du, Xiaodong
    Li, Junhui
    Wang, Liqun
    Xiong, Yuanxin
    BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2014, 78 (10) : 1685 - 1692
  • [39] Local De Novo Assembly of RAD Paired-End Contigs Using Short Sequencing Reads
    Etter, Paul D.
    Preston, Jessica L.
    Bassham, Susan
    Cresko, William A.
    Johnson, Eric A.
    PLOS ONE, 2011, 6 (04):
  • [40] De novo transcriptome assembly of Ipomoea nil using Illumina sequencing for gene discovery and SSR marker identification
    Wei, Changhe
    Tao, Xiang
    Li, Ming
    He, Bin
    Yan, Lang
    Tan, Xuemei
    Zhang, Yizheng
    MOLECULAR GENETICS AND GENOMICS, 2015, 290 (05) : 1873 - 1884