A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

[1] Baird NA(2008)Rapid SNP discovery and genetic mapping using sequenced RAD markers PLoS One 3 e3376-178

[2] Etter PD(2010)Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags PLoS Genet 6 e1000862-808

[3] Atwood TS(2011)SNP discovery and genotyping for evolutionary genetics using RAD sequencing Methods Mol Biol 772 157-510

[4] Currey MC(2011)Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted gar, an outgroup for the teleost genome duplication Genetics 188 799-352

[5] Shiver AL(2012)Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon BMC Genomics 13 244-1894

[6] Lewis ZA(2013)A RAD-based linkage map and comparative genomics in the gudgeons (genus BMC Genomics 14 32-222

[7] Selker EU(2011), Cyprinidae) Nat Rev Genet 12 499-199

[8] Cresko WA(2012)Genome-wide genetic marker discovery and genotyping using next-generation sequencing PLoS One 7 e37135-201

[9] Johnson EA(2011)Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species Nature 475 348-342

[10] Hohenlohe PA(2012)An integrated semiconductor device enabling non-optical genome sequencing BMC Genomics 13 341-231

[1] Baird NA(2008)Rapid SNP discovery and genetic mapping using sequenced RAD markers PLoS One 3 e3376-178

[2] Etter PD(2010)Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags PLoS Genet 6 e1000862-808

[3] Atwood TS(2011)SNP discovery and genotyping for evolutionary genetics using RAD sequencing Methods Mol Biol 772 157-510

[4] Currey MC(2011)Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted gar, an outgroup for the teleost genome duplication Genetics 188 799-352

[5] Shiver AL(2012)Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon BMC Genomics 13 244-1894

[6] Lewis ZA(2013)A RAD-based linkage map and comparative genomics in the gudgeons (genus BMC Genomics 14 32-222

[7] Selker EU(2011), Cyprinidae) Nat Rev Genet 12 499-199

[8] Cresko WA(2012)Genome-wide genetic marker discovery and genotyping using next-generation sequencing PLoS One 7 e37135-201

[9] Johnson EA(2011)Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species Nature 475 348-342

[10] Hohenlohe PA(2012)An integrated semiconductor device enabling non-optical genome sequencing BMC Genomics 13 341-231