Desulfoferula mesophilus gen. nov. sp. nov., a mesophilic sulfate-reducing bacterium isolated from a brackish lake sediment

被引:0
作者
Tomohiro Watanabe
Tatsuya Yabe
Jackson M. Tsuji
Manabu Fukui
机构
[1] The Institute of Low Temperature Science,Graduate School of Environmental Science
[2] Hokkaido University,undefined
[3] Hokkaido University,undefined
[4] Japan Agency for Marine-Earth Science and Technology,undefined
来源
Archives of Microbiology | 2023年 / 205卷
关键词
Sulfate-reducing bacteria; Desulfoferula; Desulfarculaceae; Brackish lake;
D O I
暂无
中图分类号
学科分类号
摘要
A novel sulfate-reducing bacterium (strain 12FAKT) was isolated from sediment sampled from a brackish lake in Japan. Respiratory growth was observed with formate and pyruvate as an electron donor. Sulfate, thiosulfate, elemental sulfur and dimethyl sulfoxide were utilized as an electron acceptor. The isolate grew over a temperature range of 18–42 °C (optimum 35–37 °C), a NaCl concentration range of 50–450 mM (optimum 150–300 mM) and a pH range of 6.6–7.5. The 12FAKT genome consists of a circular chromosome with a length of 4.5 Mbp and G + C content of 63.6%. Based on 16S rRNA gene sequence similarity, the closest cultured relative was Desulfarculus baarsii 2st14T (92.2%). Genome-based phylogenetic analysis placed strain 12FAKT within the family Desulfarculaceae but did not affiliate the strain with any existing genus. Taken together, we propose a novel species of a novel genus, Desulfoferula mesophilus gen. nov. sp. nov. with the type strain 12FAKT (= DSM 115219T = JCM 39399T).
引用
收藏
相关论文
共 88 条
  • [1] An TT(2014) gen. nov., sp. nov., a benzoate-oxidizing, sulfate-reducing bacterium isolated from water extracted from a coal bed Int J Syst Evol Microbiol 64 2907-2914
  • [2] Picardal FW(2015)Draft genome sequence of Genome Announc 3 e00970-e1915
  • [3] An TT(1969) SCBM, a new genus of sulfate-reducing bacteria, isolated from water extracted from an active coalbed methane gas well Limnol Oceanogr 14 454-458
  • [4] Picardal FW(2016)Spectrophotometric determination of hydrogen sulfide in natural waters Int J Syst Evol Microbiol 66 1242-1248
  • [5] Cline JD(1989) gen. nov., sp. nov., isolated from a methanogenic paraffin-degrading enrichment culture and emended description of the family J Bacteriol 71 6689-6695
  • [6] Davidova IA(1985)Natural relationships among sulfate-reducing eubacteria Evolution 39 783-791
  • [7] Wawrik B(2007)Confidence limits on phylogenies: an approach using the bootstrap J Bacteriol 189 4108-4119
  • [8] Callaghan AV(1984)Insights into the autotrophic CO Arch Microbiol 138 257-262
  • [9] Duncan K(2020) fixation pathway of the archaeon BMC Bioinformatics 21 257-2948
  • [10] Marks CR(2007): comprehensive analysis of the central carbon metabolism Bioinformatics 23 2947-4164