Visualisation of the T cell differentiation programme by Canonical Correspondence Analysis of transcriptomes

被引:0
作者
Masahiro Ono
Reiko J Tanaka
Manabu Kano
机构
[1] University College London,Immunobiology Section, UCL Institute of Child Health
[2] Imperial College London,Department of Bioengineering
[3] Kyoto University,Department of Systems Science, Graduate School of Informatics
来源
BMC Genomics | / 15卷
关键词
Canonical Correspondence Analysis; Multidimensional analysis; Expression microarray; RNA-seq; Immunological genomic data; T cell differentiation; Classification;
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[1]  
Ihle JN(2000)The challenges of translating knockout phenotypes into gene function Cell 102 131-134
[2]  
Vidal M(2001)A biological atlas of functional maps Cell 104 333-339
[3]  
Hyatt G(2006)Gene expression microarrays: glimpses of the immunological genome Nat Immunol 7 686-691
[4]  
Melamed R(2011)Transcriptomes of the B and T lineages compared by multiplatform microarray profiling J Immunol 186 3047-3057
[5]  
Park R(2013)Immunological Genome Project and systems immunology Trends Immunol 34 602-609
[6]  
Seguritan R(2008)The properties of high-dimensional data spaces: implications for exploring gene and protein expression data Nat Rev Cancer 8 37-49
[7]  
Laplace C(2001)Signatures of the immune response Immunity 15 375-385
[8]  
Poirot L(2007)Foxp3 transcription-factor-dependent and -independent regulation of the regulatory T cell transcriptional signature Immunity 27 786-800
[9]  
Zucchelli S(2013)Immune surveillance by CD8αα + skin-resident T cells in human herpes virus infection Nature 497 494-497
[10]  
Obst R(2013)Transcriptional reprogramming of mature CD4(+) helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes Nat Immunol 14 281-289