Cluster analysis of replicated alternative polyadenylation data using canonical correlation analysis

[1] Tian B(2017)Alternative polyadenylation of mRNA precursors Nat Rev Mol Cell Biol 18 18-30

[2] Manley JL(2012)A quantitative atlas of polyadenylation in five mammals Genome Res 22 1173-1183

[3] Derti A(2013)Analysis of alternative cleavage and polyadenylation by 3 ' region extraction and deep sequencing Nat Methods 10 133-139

[4] Garrett-Engele P(2012)Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis Plant Cell 24 4376-4388

[5] MacIsaac KD(2011)Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation Proc Natl Acad Sci U S A 108 12533-12538

[6] Stevens RC(2016)Genome-wide dynamics of alternative polyadenylation in rice Genome Res 26 1753-1760

[7] Sriram S(2013)Alternative cleavage and polyadenylation: extent, regulation and function Nat Rev Genet 14 496-506

[8] Chen R(2008)Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites Science 320 1643-1647

[9] Rohl CA(2009)Widespread shortening of 3’UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells Cell 138 673-684

[10] Johnson JM(2003)FY is an RNA 3′ end-processing factor that interacts with FCA to control the Arabidopsis floral transition Cell 113 777-787

[1] Tian B(2017)Alternative polyadenylation of mRNA precursors Nat Rev Mol Cell Biol 18 18-30

[2] Manley JL(2012)A quantitative atlas of polyadenylation in five mammals Genome Res 22 1173-1183

[3] Derti A(2013)Analysis of alternative cleavage and polyadenylation by 3 ' region extraction and deep sequencing Nat Methods 10 133-139

[4] Garrett-Engele P(2012)Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis Plant Cell 24 4376-4388

[5] MacIsaac KD(2011)Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation Proc Natl Acad Sci U S A 108 12533-12538

[6] Stevens RC(2016)Genome-wide dynamics of alternative polyadenylation in rice Genome Res 26 1753-1760

[7] Sriram S(2013)Alternative cleavage and polyadenylation: extent, regulation and function Nat Rev Genet 14 496-506

[8] Chen R(2008)Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites Science 320 1643-1647

[9] Rohl CA(2009)Widespread shortening of 3’UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells Cell 138 673-684

[10] Johnson JM(2003)FY is an RNA 3′ end-processing factor that interacts with FCA to control the Arabidopsis floral transition Cell 113 777-787